Protein–RNA interactions for Protein: Q8BWB1

Synpo2l, Synaptopodin 2-like protein, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Synpo2lQ8BWB1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Synpo2lQ8BWB1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Synpo2lQ8BWB1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Synpo2lQ8BWB1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Synpo2lQ8BWB1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Synpo2lQ8BWB1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Synpo2lQ8BWB1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Synpo2lQ8BWB1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Synpo2lQ8BWB1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Synpo2lQ8BWB1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Synpo2lQ8BWB1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Synpo2lQ8BWB1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Synpo2lQ8BWB1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.73■■□□□ 1.07
Synpo2lQ8BWB1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.72■■□□□ 1.07
Synpo2lQ8BWB1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Synpo2lQ8BWB1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Synpo2lQ8BWB1 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Synpo2lQ8BWB1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Synpo2lQ8BWB1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Synpo2lQ8BWB1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Synpo2lQ8BWB1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.69■■□□□ 1.06
Synpo2lQ8BWB1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Synpo2lQ8BWB1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Synpo2lQ8BWB1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Synpo2lQ8BWB1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Synpo2lQ8BWB1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Synpo2lQ8BWB1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Synpo2lQ8BWB1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Synpo2lQ8BWB1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Synpo2lQ8BWB1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Synpo2lQ8BWB1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Synpo2lQ8BWB1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Synpo2lQ8BWB1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Synpo2lQ8BWB1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Synpo2lQ8BWB1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Synpo2lQ8BWB1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Synpo2lQ8BWB1 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Synpo2lQ8BWB1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Synpo2lQ8BWB1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Synpo2lQ8BWB1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Synpo2lQ8BWB1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.63■■□□□ 1.05
Synpo2lQ8BWB1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Synpo2lQ8BWB1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Synpo2lQ8BWB1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Synpo2lQ8BWB1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Synpo2lQ8BWB1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Synpo2lQ8BWB1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.61■■□□□ 1.05
Synpo2lQ8BWB1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.61■■□□□ 1.05
Synpo2lQ8BWB1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.61■■□□□ 1.05
Synpo2lQ8BWB1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Synpo2lQ8BWB1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Synpo2lQ8BWB1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Synpo2lQ8BWB1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Synpo2lQ8BWB1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Synpo2lQ8BWB1 Gm7432-201ENSMUST00000210343 879 ntBASIC21.59■■□□□ 1.05
Synpo2lQ8BWB1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Synpo2lQ8BWB1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.58■■□□□ 1.05
Synpo2lQ8BWB1 Particl-201ENSMUST00000205370 1560 ntBASIC21.58■■□□□ 1.05
Synpo2lQ8BWB1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Synpo2lQ8BWB1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Synpo2lQ8BWB1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Synpo2lQ8BWB1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Synpo2lQ8BWB1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Synpo2lQ8BWB1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Synpo2lQ8BWB1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Synpo2lQ8BWB1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Synpo2lQ8BWB1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
Synpo2lQ8BWB1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.55■■□□□ 1.04
Synpo2lQ8BWB1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Synpo2lQ8BWB1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.55■■□□□ 1.04
Synpo2lQ8BWB1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Synpo2lQ8BWB1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Synpo2lQ8BWB1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Synpo2lQ8BWB1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.53■■□□□ 1.04
Synpo2lQ8BWB1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Synpo2lQ8BWB1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Synpo2lQ8BWB1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.52■■□□□ 1.04
Synpo2lQ8BWB1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Synpo2lQ8BWB1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Synpo2lQ8BWB1 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Synpo2lQ8BWB1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Synpo2lQ8BWB1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.51■■□□□ 1.03
Synpo2lQ8BWB1 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.51■■□□□ 1.03
Synpo2lQ8BWB1 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.51■■□□□ 1.03
Synpo2lQ8BWB1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Synpo2lQ8BWB1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Synpo2lQ8BWB1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Synpo2lQ8BWB1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Synpo2lQ8BWB1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Synpo2lQ8BWB1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Synpo2lQ8BWB1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Synpo2lQ8BWB1 Gm11599-201ENSMUST00000118720 878 ntBASIC21.49■■□□□ 1.03
Synpo2lQ8BWB1 Gm37136-201ENSMUST00000194368 194 ntBASIC21.49■■□□□ 1.03
Synpo2lQ8BWB1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Synpo2lQ8BWB1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Synpo2lQ8BWB1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Synpo2lQ8BWB1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Synpo2lQ8BWB1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Synpo2lQ8BWB1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Synpo2lQ8BWB1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms