Protein–RNA interactions for Protein: Q8BV79

Trank1, TPR and ankyrin repeat-containing protein 1, mousemouse

Predictions only

Length 2,999 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trank1Q8BV79 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trank1Q8BV79 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trank1Q8BV79 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trank1Q8BV79 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.1■□□□□ 0.97
Trank1Q8BV79 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trank1Q8BV79 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trank1Q8BV79 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.09■□□□□ 0.97
Trank1Q8BV79 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.09■□□□□ 0.97
Trank1Q8BV79 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trank1Q8BV79 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Trank1Q8BV79 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trank1Q8BV79 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trank1Q8BV79 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trank1Q8BV79 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trank1Q8BV79 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trank1Q8BV79 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
Trank1Q8BV79 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trank1Q8BV79 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trank1Q8BV79 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trank1Q8BV79 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trank1Q8BV79 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trank1Q8BV79 Gm7332-201ENSMUST00000118351 454 ntBASIC21.03■□□□□ 0.96
Trank1Q8BV79 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trank1Q8BV79 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trank1Q8BV79 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Trank1Q8BV79 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trank1Q8BV79 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trank1Q8BV79 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.01■□□□□ 0.95
Trank1Q8BV79 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Trank1Q8BV79 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trank1Q8BV79 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21■□□□□ 0.95
Trank1Q8BV79 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trank1Q8BV79 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trank1Q8BV79 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.98■□□□□ 0.95
Trank1Q8BV79 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.98■□□□□ 0.95
Trank1Q8BV79 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trank1Q8BV79 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trank1Q8BV79 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.97■□□□□ 0.95
Trank1Q8BV79 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trank1Q8BV79 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trank1Q8BV79 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.97■□□□□ 0.95
Trank1Q8BV79 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trank1Q8BV79 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trank1Q8BV79 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trank1Q8BV79 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.94■□□□□ 0.94
Trank1Q8BV79 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.94■□□□□ 0.94
Trank1Q8BV79 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Trank1Q8BV79 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Trank1Q8BV79 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.93■□□□□ 0.94
Trank1Q8BV79 Gm14523-201ENSMUST00000117260 558 ntBASIC20.92■□□□□ 0.94
Trank1Q8BV79 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trank1Q8BV79 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Trank1Q8BV79 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.92■□□□□ 0.94
Trank1Q8BV79 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trank1Q8BV79 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trank1Q8BV79 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.91■□□□□ 0.94
Trank1Q8BV79 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trank1Q8BV79 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.91■□□□□ 0.94
Trank1Q8BV79 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trank1Q8BV79 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trank1Q8BV79 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trank1Q8BV79 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Trank1Q8BV79 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trank1Q8BV79 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.89■□□□□ 0.93
Trank1Q8BV79 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trank1Q8BV79 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Trank1Q8BV79 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trank1Q8BV79 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trank1Q8BV79 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trank1Q8BV79 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Trank1Q8BV79 Mir3960-201ENSMUST00000198213 73 ntBASIC20.87■□□□□ 0.93
Trank1Q8BV79 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trank1Q8BV79 Gm27502-201ENSMUST00000183495 199 ntBASIC20.87■□□□□ 0.93
Trank1Q8BV79 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trank1Q8BV79 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Trank1Q8BV79 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Trank1Q8BV79 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trank1Q8BV79 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trank1Q8BV79 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trank1Q8BV79 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trank1Q8BV79 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trank1Q8BV79 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trank1Q8BV79 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trank1Q8BV79 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trank1Q8BV79 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.83■□□□□ 0.92
Trank1Q8BV79 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.82■□□□□ 0.92
Trank1Q8BV79 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trank1Q8BV79 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trank1Q8BV79 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.8■□□□□ 0.92
Trank1Q8BV79 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.8■□□□□ 0.92
Trank1Q8BV79 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trank1Q8BV79 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trank1Q8BV79 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.8■□□□□ 0.92
Trank1Q8BV79 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trank1Q8BV79 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.79■□□□□ 0.92
Trank1Q8BV79 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trank1Q8BV79 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trank1Q8BV79 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.79■□□□□ 0.92
Trank1Q8BV79 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trank1Q8BV79 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 414.6 ms