Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
Rd3Q8BRE0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rd3Q8BRE0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rd3Q8BRE0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Rd3Q8BRE0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.63
Rd3Q8BRE0 Gm4799-201ENSMUST00000095396 657 ntBASIC25.2■■□□□ 1.62
Rd3Q8BRE0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25.2■■□□□ 1.62
Rd3Q8BRE0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Rd3Q8BRE0 Scarna2-201ENSMUST00000157560 414 ntBASIC25.19■■□□□ 1.62
Rd3Q8BRE0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Rd3Q8BRE0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC25.18■■□□□ 1.62
Rd3Q8BRE0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC25.18■■□□□ 1.62
Rd3Q8BRE0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Rd3Q8BRE0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC25.17■■□□□ 1.62
Rd3Q8BRE0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Rd3Q8BRE0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Rd3Q8BRE0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC25.16■■□□□ 1.62
Rd3Q8BRE0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Rd3Q8BRE0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Rd3Q8BRE0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Rd3Q8BRE0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Rd3Q8BRE0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Rd3Q8BRE0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25.15■■□□□ 1.62
Rd3Q8BRE0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Rd3Q8BRE0 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.14■■□□□ 1.62
Rd3Q8BRE0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
Rd3Q8BRE0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC25.13■■□□□ 1.61
Rd3Q8BRE0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Rd3Q8BRE0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC25.12■■□□□ 1.61
Rd3Q8BRE0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Rd3Q8BRE0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.12■■□□□ 1.61
Rd3Q8BRE0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC25.11■■□□□ 1.61
Rd3Q8BRE0 Gm11687-201ENSMUST00000118911 886 ntBASIC25.11■■□□□ 1.61
Rd3Q8BRE0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC25.11■■□□□ 1.61
Rd3Q8BRE0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Rd3Q8BRE0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Rd3Q8BRE0 Gm16437-201ENSMUST00000025669 507 ntBASIC25.1■■□□□ 1.61
Rd3Q8BRE0 Gm9806-201ENSMUST00000051080 552 ntBASIC25.1■■□□□ 1.61
Rd3Q8BRE0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Rd3Q8BRE0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Rd3Q8BRE0 Pkd1-207ENSMUST00000228550 1050 ntBASIC25.09■■□□□ 1.61
Rd3Q8BRE0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Rd3Q8BRE0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Rd3Q8BRE0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Rd3Q8BRE0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.6
Rd3Q8BRE0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Rd3Q8BRE0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC25.07■■□□□ 1.6
Rd3Q8BRE0 Mir3960-201ENSMUST00000198213 73 ntBASIC25.07■■□□□ 1.6
Rd3Q8BRE0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Rd3Q8BRE0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Rd3Q8BRE0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
Rd3Q8BRE0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Rd3Q8BRE0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Rd3Q8BRE0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
Rd3Q8BRE0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC25.05■■□□□ 1.6
Rd3Q8BRE0 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Rd3Q8BRE0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rd3Q8BRE0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rd3Q8BRE0 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.05■■□□□ 1.6
Rd3Q8BRE0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
Rd3Q8BRE0 Gm37136-201ENSMUST00000194368 194 ntBASIC25.04■■□□□ 1.6
Rd3Q8BRE0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.03■■□□□ 1.6
Rd3Q8BRE0 AC154454.1-201ENSMUST00000225253 216 ntBASIC25.03■■□□□ 1.6
Rd3Q8BRE0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rd3Q8BRE0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rd3Q8BRE0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Rd3Q8BRE0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rd3Q8BRE0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Rd3Q8BRE0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Rd3Q8BRE0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC25■■□□□ 1.59
Rd3Q8BRE0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
Rd3Q8BRE0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Rd3Q8BRE0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Rd3Q8BRE0 Gm45364-201ENSMUST00000210883 159 ntBASIC24.99■■□□□ 1.59
Rd3Q8BRE0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rd3Q8BRE0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.98■■□□□ 1.59
Rd3Q8BRE0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rd3Q8BRE0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC24.98■■□□□ 1.59
Rd3Q8BRE0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.97■■□□□ 1.59
Rd3Q8BRE0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
Rd3Q8BRE0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rd3Q8BRE0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC24.96■■□□□ 1.59
Rd3Q8BRE0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
Rd3Q8BRE0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Rd3Q8BRE0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rd3Q8BRE0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rd3Q8BRE0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rd3Q8BRE0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Rd3Q8BRE0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Rd3Q8BRE0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC24.93■■□□□ 1.58
Rd3Q8BRE0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Rd3Q8BRE0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC24.92■■□□□ 1.58
Rd3Q8BRE0 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Rd3Q8BRE0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Rd3Q8BRE0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Rd3Q8BRE0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC24.91■■□□□ 1.58
Rd3Q8BRE0 Gm12366-201ENSMUST00000121722 873 ntBASIC24.91■■□□□ 1.58
Rd3Q8BRE0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC24.91■■□□□ 1.58
Rd3Q8BRE0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Rd3Q8BRE0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC24.91■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms