Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.54■□□□□ 0.88
Cdhr3Q8BL00 Zfp131-205ENSMUST00000223812 663 ntBASIC20.54■□□□□ 0.88
Cdhr3Q8BL00 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.54■□□□□ 0.88
Cdhr3Q8BL00 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdhr3Q8BL00 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdhr3Q8BL00 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdhr3Q8BL00 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Cdhr3Q8BL00 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cdhr3Q8BL00 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cdhr3Q8BL00 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cdhr3Q8BL00 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdhr3Q8BL00 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdhr3Q8BL00 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.51■□□□□ 0.87
Cdhr3Q8BL00 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdhr3Q8BL00 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Cdhr3Q8BL00 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.5■□□□□ 0.87
Cdhr3Q8BL00 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cdhr3Q8BL00 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdhr3Q8BL00 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdhr3Q8BL00 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.49■□□□□ 0.87
Cdhr3Q8BL00 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdhr3Q8BL00 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cdhr3Q8BL00 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.48■□□□□ 0.87
Cdhr3Q8BL00 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Cdhr3Q8BL00 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdhr3Q8BL00 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.48■□□□□ 0.87
Cdhr3Q8BL00 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cdhr3Q8BL00 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Cdhr3Q8BL00 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdhr3Q8BL00 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdhr3Q8BL00 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Cdhr3Q8BL00 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdhr3Q8BL00 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cdhr3Q8BL00 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdhr3Q8BL00 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdhr3Q8BL00 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdhr3Q8BL00 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Cdhr3Q8BL00 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Cdhr3Q8BL00 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdhr3Q8BL00 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.44■□□□□ 0.86
Cdhr3Q8BL00 Gm9397-201ENSMUST00000200125 605 ntBASIC20.44■□□□□ 0.86
Cdhr3Q8BL00 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdhr3Q8BL00 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.44■□□□□ 0.86
Cdhr3Q8BL00 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdhr3Q8BL00 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdhr3Q8BL00 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdhr3Q8BL00 Gm24970-201ENSMUST00000175582 82 ntBASIC20.43■□□□□ 0.86
Cdhr3Q8BL00 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdhr3Q8BL00 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdhr3Q8BL00 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdhr3Q8BL00 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cdhr3Q8BL00 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Cdhr3Q8BL00 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdhr3Q8BL00 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdhr3Q8BL00 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.41■□□□□ 0.86
Cdhr3Q8BL00 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Cdhr3Q8BL00 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdhr3Q8BL00 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdhr3Q8BL00 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdhr3Q8BL00 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Cdhr3Q8BL00 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Cdhr3Q8BL00 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Cdhr3Q8BL00 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdhr3Q8BL00 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdhr3Q8BL00 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Cdhr3Q8BL00 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cdhr3Q8BL00 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdhr3Q8BL00 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdhr3Q8BL00 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdhr3Q8BL00 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cdhr3Q8BL00 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdhr3Q8BL00 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cdhr3Q8BL00 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdhr3Q8BL00 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdhr3Q8BL00 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cdhr3Q8BL00 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdhr3Q8BL00 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cdhr3Q8BL00 Gm30023-201ENSMUST00000197970 889 ntBASIC20.37■□□□□ 0.85
Cdhr3Q8BL00 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdhr3Q8BL00 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdhr3Q8BL00 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdhr3Q8BL00 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.35■□□□□ 0.85
Cdhr3Q8BL00 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdhr3Q8BL00 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdhr3Q8BL00 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdhr3Q8BL00 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cdhr3Q8BL00 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.34■□□□□ 0.85
Cdhr3Q8BL00 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.34■□□□□ 0.85
Cdhr3Q8BL00 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.34■□□□□ 0.85
Cdhr3Q8BL00 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cdhr3Q8BL00 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdhr3Q8BL00 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cdhr3Q8BL00 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdhr3Q8BL00 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdhr3Q8BL00 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cdhr3Q8BL00 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cdhr3Q8BL00 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.32■□□□□ 0.84
Cdhr3Q8BL00 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
Cdhr3Q8BL00 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdhr3Q8BL00 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms