Protein–RNA interactions for Protein: Q8BKS9

Pum3, Pumilio homolog 3, mousemouse

Known RBP Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pum3Q8BKS9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Pum3Q8BKS9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pum3Q8BKS9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pum3Q8BKS9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Pum3Q8BKS9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
Pum3Q8BKS9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Pum3Q8BKS9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pum3Q8BKS9 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pum3Q8BKS9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Pum3Q8BKS9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25■■□□□ 1.59
Pum3Q8BKS9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25■■□□□ 1.59
Pum3Q8BKS9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Pum3Q8BKS9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
Pum3Q8BKS9 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Pum3Q8BKS9 Particl-201ENSMUST00000205370 1560 ntBASIC24.97■■□□□ 1.59
Pum3Q8BKS9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Pum3Q8BKS9 Gm7432-201ENSMUST00000210343 879 ntBASIC24.96■■□□□ 1.59
Pum3Q8BKS9 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Pum3Q8BKS9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC24.95■■□□□ 1.58
Pum3Q8BKS9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.94■■□□□ 1.58
Pum3Q8BKS9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pum3Q8BKS9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
Pum3Q8BKS9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Pum3Q8BKS9 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Pum3Q8BKS9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Pum3Q8BKS9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pum3Q8BKS9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Pum3Q8BKS9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.92■■□□□ 1.58
Pum3Q8BKS9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pum3Q8BKS9 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
Pum3Q8BKS9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pum3Q8BKS9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
Pum3Q8BKS9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
Pum3Q8BKS9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Pum3Q8BKS9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.89■■□□□ 1.58
Pum3Q8BKS9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.89■■□□□ 1.58
Pum3Q8BKS9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.89■■□□□ 1.58
Pum3Q8BKS9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Pum3Q8BKS9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Pum3Q8BKS9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Pum3Q8BKS9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Pum3Q8BKS9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Pum3Q8BKS9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Pum3Q8BKS9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Pum3Q8BKS9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Pum3Q8BKS9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Pum3Q8BKS9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC24.85■■□□□ 1.57
Pum3Q8BKS9 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
Pum3Q8BKS9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.84■■□□□ 1.57
Pum3Q8BKS9 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
Pum3Q8BKS9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Pum3Q8BKS9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Pum3Q8BKS9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
Pum3Q8BKS9 Gm11599-201ENSMUST00000118720 878 ntBASIC24.83■■□□□ 1.57
Pum3Q8BKS9 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.83■■□□□ 1.56
Pum3Q8BKS9 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.83■■□□□ 1.56
Pum3Q8BKS9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pum3Q8BKS9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC24.82■■□□□ 1.56
Pum3Q8BKS9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
Pum3Q8BKS9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Pum3Q8BKS9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pum3Q8BKS9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pum3Q8BKS9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Pum3Q8BKS9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
Pum3Q8BKS9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Pum3Q8BKS9 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Pum3Q8BKS9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC24.81■■□□□ 1.56
Pum3Q8BKS9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
Pum3Q8BKS9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Pum3Q8BKS9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Pum3Q8BKS9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pum3Q8BKS9 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pum3Q8BKS9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Pum3Q8BKS9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC24.78■■□□□ 1.56
Pum3Q8BKS9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pum3Q8BKS9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pum3Q8BKS9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Pum3Q8BKS9 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Pum3Q8BKS9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pum3Q8BKS9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pum3Q8BKS9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Pum3Q8BKS9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pum3Q8BKS9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Pum3Q8BKS9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Pum3Q8BKS9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pum3Q8BKS9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Pum3Q8BKS9 Gm37136-201ENSMUST00000194368 194 ntBASIC24.75■■□□□ 1.55
Pum3Q8BKS9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Pum3Q8BKS9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Pum3Q8BKS9 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Pum3Q8BKS9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.72■■□□□ 1.55
Pum3Q8BKS9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pum3Q8BKS9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pum3Q8BKS9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pum3Q8BKS9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pum3Q8BKS9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pum3Q8BKS9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pum3Q8BKS9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pum3Q8BKS9 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pum3Q8BKS9 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms