Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upk3bQ80YF6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upk3bQ80YF6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Upk3bQ80YF6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Upk3bQ80YF6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.82■□□□□ 0.76
Upk3bQ80YF6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Upk3bQ80YF6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Upk3bQ80YF6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Upk3bQ80YF6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.82■□□□□ 0.76
Upk3bQ80YF6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.82■□□□□ 0.76
Upk3bQ80YF6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Upk3bQ80YF6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Upk3bQ80YF6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.81■□□□□ 0.76
Upk3bQ80YF6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Upk3bQ80YF6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Upk3bQ80YF6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Upk3bQ80YF6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Upk3bQ80YF6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Upk3bQ80YF6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Upk3bQ80YF6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Upk3bQ80YF6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Upk3bQ80YF6 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Upk3bQ80YF6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Upk3bQ80YF6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Upk3bQ80YF6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Upk3bQ80YF6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Upk3bQ80YF6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Upk3bQ80YF6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Upk3bQ80YF6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Upk3bQ80YF6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Upk3bQ80YF6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Upk3bQ80YF6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Upk3bQ80YF6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Upk3bQ80YF6 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.76■□□□□ 0.75
Upk3bQ80YF6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Upk3bQ80YF6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Upk3bQ80YF6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Upk3bQ80YF6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Upk3bQ80YF6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Upk3bQ80YF6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.75■□□□□ 0.75
Upk3bQ80YF6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.75■□□□□ 0.75
Upk3bQ80YF6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.75■□□□□ 0.75
Upk3bQ80YF6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Upk3bQ80YF6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Upk3bQ80YF6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Upk3bQ80YF6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Upk3bQ80YF6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Upk3bQ80YF6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Upk3bQ80YF6 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.73■□□□□ 0.75
Upk3bQ80YF6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Upk3bQ80YF6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.73■□□□□ 0.75
Upk3bQ80YF6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Upk3bQ80YF6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Upk3bQ80YF6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Upk3bQ80YF6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Upk3bQ80YF6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Upk3bQ80YF6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Upk3bQ80YF6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Upk3bQ80YF6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Upk3bQ80YF6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Upk3bQ80YF6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Upk3bQ80YF6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Upk3bQ80YF6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Upk3bQ80YF6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Upk3bQ80YF6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Upk3bQ80YF6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Upk3bQ80YF6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Upk3bQ80YF6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Upk3bQ80YF6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Upk3bQ80YF6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Upk3bQ80YF6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Upk3bQ80YF6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Upk3bQ80YF6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Upk3bQ80YF6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Upk3bQ80YF6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Upk3bQ80YF6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.68■□□□□ 0.74
Upk3bQ80YF6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Upk3bQ80YF6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Upk3bQ80YF6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.67■□□□□ 0.74
Upk3bQ80YF6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Upk3bQ80YF6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Upk3bQ80YF6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Upk3bQ80YF6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Upk3bQ80YF6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Upk3bQ80YF6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Upk3bQ80YF6 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Upk3bQ80YF6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Upk3bQ80YF6 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Upk3bQ80YF6 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Upk3bQ80YF6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Upk3bQ80YF6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Upk3bQ80YF6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Upk3bQ80YF6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Upk3bQ80YF6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Upk3bQ80YF6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Upk3bQ80YF6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Upk3bQ80YF6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Upk3bQ80YF6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Upk3bQ80YF6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.62■□□□□ 0.73
Upk3bQ80YF6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms