Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Scn10aQ6QIY3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Scn10aQ6QIY3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
Scn10aQ6QIY3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Scn10aQ6QIY3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Scn10aQ6QIY3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Scn10aQ6QIY3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC27.94■■■□□ 2.06
Scn10aQ6QIY3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC27.93■■■□□ 2.06
Scn10aQ6QIY3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC27.93■■■□□ 2.06
Scn10aQ6QIY3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC27.92■■■□□ 2.06
Scn10aQ6QIY3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Scn10aQ6QIY3 Gm16437-201ENSMUST00000025669 507 ntBASIC27.91■■■□□ 2.06
Scn10aQ6QIY3 Mir3960-201ENSMUST00000198213 73 ntBASIC27.9■■■□□ 2.06
Scn10aQ6QIY3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC27.9■■■□□ 2.06
Scn10aQ6QIY3 Gm27502-201ENSMUST00000183495 199 ntBASIC27.9■■■□□ 2.06
Scn10aQ6QIY3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC27.89■■■□□ 2.06
Scn10aQ6QIY3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Scn10aQ6QIY3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
Scn10aQ6QIY3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC27.89■■■□□ 2.06
Scn10aQ6QIY3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Scn10aQ6QIY3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Scn10aQ6QIY3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC27.88■■■□□ 2.05
Scn10aQ6QIY3 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Scn10aQ6QIY3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC27.88■■■□□ 2.05
Scn10aQ6QIY3 Gm37136-201ENSMUST00000194368 194 ntBASIC27.87■■■□□ 2.05
Scn10aQ6QIY3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC27.86■■■□□ 2.05
Scn10aQ6QIY3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Scn10aQ6QIY3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Scn10aQ6QIY3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Scn10aQ6QIY3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Scn10aQ6QIY3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Scn10aQ6QIY3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC27.83■■■□□ 2.05
Scn10aQ6QIY3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Scn10aQ6QIY3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Scn10aQ6QIY3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Scn10aQ6QIY3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC27.82■■■□□ 2.04
Scn10aQ6QIY3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.81■■■□□ 2.04
Scn10aQ6QIY3 Gm7332-201ENSMUST00000118351 454 ntBASIC27.8■■■□□ 2.04
Scn10aQ6QIY3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Scn10aQ6QIY3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC27.8■■■□□ 2.04
Scn10aQ6QIY3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC27.79■■■□□ 2.04
Scn10aQ6QIY3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Scn10aQ6QIY3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Scn10aQ6QIY3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Scn10aQ6QIY3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Scn10aQ6QIY3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Scn10aQ6QIY3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Scn10aQ6QIY3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC27.77■■■□□ 2.04
Scn10aQ6QIY3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Scn10aQ6QIY3 Gm9905-201ENSMUST00000065740 1845 ntBASIC27.75■■■□□ 2.03
Scn10aQ6QIY3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Scn10aQ6QIY3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Scn10aQ6QIY3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC27.73■■■□□ 2.03
Scn10aQ6QIY3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC27.73■■■□□ 2.03
Scn10aQ6QIY3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC27.73■■■□□ 2.03
Scn10aQ6QIY3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC27.72■■■□□ 2.03
Scn10aQ6QIY3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Scn10aQ6QIY3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC27.71■■■□□ 2.03
Scn10aQ6QIY3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Scn10aQ6QIY3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Scn10aQ6QIY3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Scn10aQ6QIY3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Scn10aQ6QIY3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC27.7■■■□□ 2.03
Scn10aQ6QIY3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC27.7■■■□□ 2.03
Scn10aQ6QIY3 AC151971.4-201ENSMUST00000214717 704 ntBASIC27.7■■■□□ 2.03
Scn10aQ6QIY3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Scn10aQ6QIY3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Scn10aQ6QIY3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Scn10aQ6QIY3 Gm13889-201ENSMUST00000099689 1386 ntBASIC27.69■■■□□ 2.02
Scn10aQ6QIY3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Scn10aQ6QIY3 Gm12818-201ENSMUST00000117562 1349 ntBASIC27.68■■■□□ 2.02
Scn10aQ6QIY3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC27.68■■■□□ 2.02
Scn10aQ6QIY3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Scn10aQ6QIY3 Gm14523-201ENSMUST00000117260 558 ntBASIC27.67■■■□□ 2.02
Scn10aQ6QIY3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Scn10aQ6QIY3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Scn10aQ6QIY3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Scn10aQ6QIY3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Scn10aQ6QIY3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Scn10aQ6QIY3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Scn10aQ6QIY3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Scn10aQ6QIY3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Scn10aQ6QIY3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
Scn10aQ6QIY3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
Scn10aQ6QIY3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC27.65■■■□□ 2.02
Scn10aQ6QIY3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Scn10aQ6QIY3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC27.64■■■□□ 2.01
Scn10aQ6QIY3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Scn10aQ6QIY3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Scn10aQ6QIY3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Scn10aQ6QIY3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Scn10aQ6QIY3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.01
Scn10aQ6QIY3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
Scn10aQ6QIY3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
Scn10aQ6QIY3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Scn10aQ6QIY3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Scn10aQ6QIY3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC27.59■■■□□ 2.01
Scn10aQ6QIY3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Scn10aQ6QIY3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Scn10aQ6QIY3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC27.57■■■□□ 2
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms