Protein–RNA interactions for Protein: Q6A026

Pds5a, Sister chromatid cohesion protein PDS5 homolog A, mousemouse

Predictions only

Length 1,332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5aQ6A026 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC25.67■■□□□ 1.7
Pds5aQ6A026 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC25.67■■□□□ 1.7
Pds5aQ6A026 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25.66■■□□□ 1.7
Pds5aQ6A026 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Pds5aQ6A026 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Pds5aQ6A026 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC25.65■■□□□ 1.7
Pds5aQ6A026 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
Pds5aQ6A026 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25.63■■□□□ 1.69
Pds5aQ6A026 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC25.62■■□□□ 1.69
Pds5aQ6A026 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Pds5aQ6A026 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Pds5aQ6A026 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.58■■□□□ 1.69
Pds5aQ6A026 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC25.58■■□□□ 1.69
Pds5aQ6A026 Gm7432-201ENSMUST00000210343 879 ntBASIC25.56■■□□□ 1.68
Pds5aQ6A026 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Pds5aQ6A026 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pds5aQ6A026 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
Pds5aQ6A026 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pds5aQ6A026 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Pds5aQ6A026 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC25.55■■□□□ 1.68
Pds5aQ6A026 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC25.55■■□□□ 1.68
Pds5aQ6A026 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Pds5aQ6A026 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC25.54■■□□□ 1.68
Pds5aQ6A026 Particl-201ENSMUST00000205370 1560 ntBASIC25.53■■□□□ 1.68
Pds5aQ6A026 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Pds5aQ6A026 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pds5aQ6A026 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC25.51■■□□□ 1.67
Pds5aQ6A026 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pds5aQ6A026 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Pds5aQ6A026 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Pds5aQ6A026 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Pds5aQ6A026 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Pds5aQ6A026 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC25.46■■□□□ 1.67
Pds5aQ6A026 AC131739.1-201ENSMUST00000221692 1245 ntBASIC25.46■■□□□ 1.67
Pds5aQ6A026 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.67
Pds5aQ6A026 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
Pds5aQ6A026 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC25.45■■□□□ 1.66
Pds5aQ6A026 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Pds5aQ6A026 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Pds5aQ6A026 Gm11599-201ENSMUST00000118720 878 ntBASIC25.44■■□□□ 1.66
Pds5aQ6A026 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
Pds5aQ6A026 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Pds5aQ6A026 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Pds5aQ6A026 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Pds5aQ6A026 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Pds5aQ6A026 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Pds5aQ6A026 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Pds5aQ6A026 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Pds5aQ6A026 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
Pds5aQ6A026 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Pds5aQ6A026 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Pds5aQ6A026 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Pds5aQ6A026 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
Pds5aQ6A026 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
Pds5aQ6A026 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pds5aQ6A026 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pds5aQ6A026 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pds5aQ6A026 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
Pds5aQ6A026 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Pds5aQ6A026 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Pds5aQ6A026 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
Pds5aQ6A026 Gm37136-201ENSMUST00000194368 194 ntBASIC25.35■■□□□ 1.65
Pds5aQ6A026 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Pds5aQ6A026 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Pds5aQ6A026 Gm5987-201ENSMUST00000196433 1151 ntBASIC25.33■■□□□ 1.64
Pds5aQ6A026 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Pds5aQ6A026 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Pds5aQ6A026 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Pds5aQ6A026 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Pds5aQ6A026 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC25.32■■□□□ 1.64
Pds5aQ6A026 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC25.31■■□□□ 1.64
Pds5aQ6A026 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC25.31■■□□□ 1.64
Pds5aQ6A026 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Pds5aQ6A026 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
Pds5aQ6A026 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Pds5aQ6A026 Gm37847-201ENSMUST00000192163 1497 ntBASIC25.3■■□□□ 1.64
Pds5aQ6A026 Gm31748-201ENSMUST00000194938 1497 ntBASIC25.3■■□□□ 1.64
Pds5aQ6A026 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Pds5aQ6A026 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC25.3■■□□□ 1.64
Pds5aQ6A026 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Pds5aQ6A026 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Pds5aQ6A026 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Pds5aQ6A026 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
Pds5aQ6A026 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pds5aQ6A026 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pds5aQ6A026 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pds5aQ6A026 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Pds5aQ6A026 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Pds5aQ6A026 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
Pds5aQ6A026 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Pds5aQ6A026 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC25.26■■□□□ 1.63
Pds5aQ6A026 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Pds5aQ6A026 Gm14121-201ENSMUST00000121441 1380 ntBASIC25.25■■□□□ 1.63
Pds5aQ6A026 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Pds5aQ6A026 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Pds5aQ6A026 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
Pds5aQ6A026 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC25.23■■□□□ 1.63
Pds5aQ6A026 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pds5aQ6A026 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pds5aQ6A026 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms