Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Col11a2Q64739 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Col11a2Q64739 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Col11a2Q64739 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Col11a2Q64739 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Col11a2Q64739 Gm7332-201ENSMUST00000118351 454 ntBASIC29.94■■■□□ 2.38
Col11a2Q64739 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC29.93■■■□□ 2.38
Col11a2Q64739 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Col11a2Q64739 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Col11a2Q64739 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Col11a2Q64739 Mir3960-201ENSMUST00000198213 73 ntBASIC29.91■■■□□ 2.38
Col11a2Q64739 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
Col11a2Q64739 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Col11a2Q64739 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC29.88■■■□□ 2.37
Col11a2Q64739 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
Col11a2Q64739 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Col11a2Q64739 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC29.86■■■□□ 2.37
Col11a2Q64739 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Col11a2Q64739 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Col11a2Q64739 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Col11a2Q64739 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Col11a2Q64739 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Col11a2Q64739 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Col11a2Q64739 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Col11a2Q64739 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
Col11a2Q64739 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
Col11a2Q64739 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC29.81■■■□□ 2.36
Col11a2Q64739 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
Col11a2Q64739 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC29.81■■■□□ 2.36
Col11a2Q64739 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Col11a2Q64739 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC29.79■■■□□ 2.36
Col11a2Q64739 AC151971.4-201ENSMUST00000214717 704 ntBASIC29.79■■■□□ 2.36
Col11a2Q64739 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Col11a2Q64739 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
Col11a2Q64739 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Col11a2Q64739 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Col11a2Q64739 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Col11a2Q64739 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC29.77■■■□□ 2.36
Col11a2Q64739 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Col11a2Q64739 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Col11a2Q64739 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Col11a2Q64739 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
Col11a2Q64739 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC29.76■■■□□ 2.36
Col11a2Q64739 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Col11a2Q64739 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Col11a2Q64739 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC29.76■■■□□ 2.35
Col11a2Q64739 Gm37136-201ENSMUST00000194368 194 ntBASIC29.75■■■□□ 2.35
Col11a2Q64739 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Col11a2Q64739 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC29.74■■■□□ 2.35
Col11a2Q64739 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29.73■■■□□ 2.35
Col11a2Q64739 Gm14523-201ENSMUST00000117260 558 ntBASIC29.72■■■□□ 2.35
Col11a2Q64739 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC29.72■■■□□ 2.35
Col11a2Q64739 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC29.72■■■□□ 2.35
Col11a2Q64739 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Col11a2Q64739 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Col11a2Q64739 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC29.71■■■□□ 2.35
Col11a2Q64739 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Col11a2Q64739 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Col11a2Q64739 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
Col11a2Q64739 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Col11a2Q64739 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC29.68■■■□□ 2.34
Col11a2Q64739 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Col11a2Q64739 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Col11a2Q64739 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
Col11a2Q64739 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC29.66■■■□□ 2.34
Col11a2Q64739 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Col11a2Q64739 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC29.66■■■□□ 2.34
Col11a2Q64739 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Col11a2Q64739 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
Col11a2Q64739 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Col11a2Q64739 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC29.64■■■□□ 2.34
Col11a2Q64739 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
Col11a2Q64739 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.33
Col11a2Q64739 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
Col11a2Q64739 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Col11a2Q64739 Gm22567-201ENSMUST00000175542 342 ntBASIC29.62■■■□□ 2.33
Col11a2Q64739 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC29.61■■■□□ 2.33
Col11a2Q64739 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Col11a2Q64739 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC29.59■■■□□ 2.33
Col11a2Q64739 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
Col11a2Q64739 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC29.59■■■□□ 2.33
Col11a2Q64739 Gm9905-201ENSMUST00000065740 1845 ntBASIC29.59■■■□□ 2.33
Col11a2Q64739 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Col11a2Q64739 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Col11a2Q64739 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC29.59■■■□□ 2.33
Col11a2Q64739 AC122317.2-201ENSMUST00000218708 1248 ntBASIC29.59■■■□□ 2.33
Col11a2Q64739 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Col11a2Q64739 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Col11a2Q64739 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC29.58■■■□□ 2.33
Col11a2Q64739 Gm13889-201ENSMUST00000099689 1386 ntBASIC29.58■■■□□ 2.33
Col11a2Q64739 Gm12818-201ENSMUST00000117562 1349 ntBASIC29.58■■■□□ 2.33
Col11a2Q64739 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC29.58■■■□□ 2.33
Col11a2Q64739 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Col11a2Q64739 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC29.57■■■□□ 2.32
Col11a2Q64739 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC29.57■■■□□ 2.32
Col11a2Q64739 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
Col11a2Q64739 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Col11a2Q64739 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
Col11a2Q64739 Gm5812-201ENSMUST00000061073 957 ntBASIC29.56■■■□□ 2.32
Col11a2Q64739 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC29.56■■■□□ 2.32
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms