Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
Clcn1Q64347 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC30.26■■■□□ 2.43
Clcn1Q64347 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
Clcn1Q64347 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Clcn1Q64347 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Clcn1Q64347 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC30.23■■■□□ 2.43
Clcn1Q64347 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Clcn1Q64347 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Clcn1Q64347 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC30.22■■■□□ 2.43
Clcn1Q64347 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Clcn1Q64347 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Clcn1Q64347 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Clcn1Q64347 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC30.21■■■□□ 2.43
Clcn1Q64347 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Clcn1Q64347 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Clcn1Q64347 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Clcn1Q64347 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC30.2■■■□□ 2.43
Clcn1Q64347 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Clcn1Q64347 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
Clcn1Q64347 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Clcn1Q64347 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Clcn1Q64347 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
Clcn1Q64347 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Clcn1Q64347 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Clcn1Q64347 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Clcn1Q64347 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Clcn1Q64347 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC30.17■■■□□ 2.42
Clcn1Q64347 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
Clcn1Q64347 Gm16437-201ENSMUST00000025669 507 ntBASIC30.15■■■□□ 2.42
Clcn1Q64347 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Clcn1Q64347 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC30.14■■■□□ 2.42
Clcn1Q64347 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Clcn1Q64347 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
Clcn1Q64347 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Clcn1Q64347 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC30.13■■■□□ 2.41
Clcn1Q64347 Gm4799-201ENSMUST00000095396 657 ntBASIC30.13■■■□□ 2.41
Clcn1Q64347 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Clcn1Q64347 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Clcn1Q64347 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC30.12■■■□□ 2.41
Clcn1Q64347 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Clcn1Q64347 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
Clcn1Q64347 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
Clcn1Q64347 Gm9806-201ENSMUST00000051080 552 ntBASIC30.1■■■□□ 2.41
Clcn1Q64347 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Clcn1Q64347 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
Clcn1Q64347 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC30.08■■■□□ 2.41
Clcn1Q64347 Gm12366-201ENSMUST00000121722 873 ntBASIC30.08■■■□□ 2.41
Clcn1Q64347 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC30.08■■■□□ 2.41
Clcn1Q64347 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC30.08■■■□□ 2.41
Clcn1Q64347 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC30.08■■■□□ 2.41
Clcn1Q64347 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Clcn1Q64347 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC30.08■■■□□ 2.41
Clcn1Q64347 Gm5786-201ENSMUST00000085368 882 ntBASIC30.08■■■□□ 2.41
Clcn1Q64347 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC30.07■■■□□ 2.4
Clcn1Q64347 Gm11687-201ENSMUST00000118911 886 ntBASIC30.07■■■□□ 2.4
Clcn1Q64347 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Clcn1Q64347 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC30.06■■■□□ 2.4
Clcn1Q64347 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Clcn1Q64347 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC30.05■■■□□ 2.4
Clcn1Q64347 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Clcn1Q64347 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC30.04■■■□□ 2.4
Clcn1Q64347 Gm45364-201ENSMUST00000210883 159 ntBASIC30.04■■■□□ 2.4
Clcn1Q64347 Pkd1-207ENSMUST00000228550 1050 ntBASIC30.04■■■□□ 2.4
Clcn1Q64347 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Clcn1Q64347 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
Clcn1Q64347 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
Clcn1Q64347 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Clcn1Q64347 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Clcn1Q64347 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
Clcn1Q64347 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Clcn1Q64347 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Clcn1Q64347 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC30■■■□□ 2.39
Clcn1Q64347 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC30■■■□□ 2.39
Clcn1Q64347 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC30■■■□□ 2.39
Clcn1Q64347 Gm27502-201ENSMUST00000183495 199 ntBASIC29.99■■■□□ 2.39
Clcn1Q64347 Gm9905-201ENSMUST00000065740 1845 ntBASIC29.99■■■□□ 2.39
Clcn1Q64347 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC29.98■■■□□ 2.39
Clcn1Q64347 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC29.98■■■□□ 2.39
Clcn1Q64347 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC29.98■■■□□ 2.39
Clcn1Q64347 Mir3960-201ENSMUST00000198213 73 ntBASIC29.98■■■□□ 2.39
Clcn1Q64347 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Clcn1Q64347 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC29.97■■■□□ 2.39
Clcn1Q64347 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Clcn1Q64347 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Clcn1Q64347 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Clcn1Q64347 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
Clcn1Q64347 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Clcn1Q64347 Gm37136-201ENSMUST00000194368 194 ntBASIC29.95■■■□□ 2.39
Clcn1Q64347 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Clcn1Q64347 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Clcn1Q64347 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC29.94■■■□□ 2.38
Clcn1Q64347 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Clcn1Q64347 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Clcn1Q64347 AC154454.1-201ENSMUST00000225253 216 ntBASIC29.93■■■□□ 2.38
Clcn1Q64347 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Clcn1Q64347 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Clcn1Q64347 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
Clcn1Q64347 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC29.91■■■□□ 2.38
Clcn1Q64347 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
Clcn1Q64347 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Retrieved 100 of 76,532 protein–RNA pairs in 93.2 ms