Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Six4Q61321 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Six4Q61321 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Six4Q61321 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Six4Q61321 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.01■■□□□ 1.43
Six4Q61321 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Six4Q61321 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24■■□□□ 1.43
Six4Q61321 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Six4Q61321 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Six4Q61321 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Six4Q61321 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.98■■□□□ 1.43
Six4Q61321 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Six4Q61321 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Six4Q61321 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Six4Q61321 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Six4Q61321 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Six4Q61321 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Six4Q61321 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
Six4Q61321 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Six4Q61321 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Six4Q61321 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Six4Q61321 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Six4Q61321 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Six4Q61321 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Six4Q61321 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Six4Q61321 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Six4Q61321 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Six4Q61321 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Six4Q61321 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Six4Q61321 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
Six4Q61321 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.92■■□□□ 1.42
Six4Q61321 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Six4Q61321 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
Six4Q61321 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Six4Q61321 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Six4Q61321 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Six4Q61321 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Six4Q61321 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Six4Q61321 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Six4Q61321 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Six4Q61321 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
Six4Q61321 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Six4Q61321 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
Six4Q61321 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Six4Q61321 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Six4Q61321 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
Six4Q61321 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Six4Q61321 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Six4Q61321 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Six4Q61321 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Six4Q61321 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Six4Q61321 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Six4Q61321 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
Six4Q61321 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Six4Q61321 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Six4Q61321 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Six4Q61321 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Six4Q61321 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Six4Q61321 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.81■■□□□ 1.4
Six4Q61321 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.81■■□□□ 1.4
Six4Q61321 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Six4Q61321 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Six4Q61321 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Six4Q61321 Particl-201ENSMUST00000205370 1560 ntBASIC23.81■■□□□ 1.4
Six4Q61321 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.8■■□□□ 1.4
Six4Q61321 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.8■■□□□ 1.4
Six4Q61321 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Six4Q61321 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Six4Q61321 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Six4Q61321 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Six4Q61321 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Six4Q61321 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
Six4Q61321 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.78■■□□□ 1.4
Six4Q61321 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Six4Q61321 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.77■■□□□ 1.4
Six4Q61321 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.77■■□□□ 1.4
Six4Q61321 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.77■■□□□ 1.4
Six4Q61321 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Six4Q61321 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Six4Q61321 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.76■■□□□ 1.39
Six4Q61321 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Six4Q61321 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Six4Q61321 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.73■■□□□ 1.39
Six4Q61321 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Six4Q61321 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Six4Q61321 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Six4Q61321 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Six4Q61321 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.71■■□□□ 1.39
Six4Q61321 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Six4Q61321 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Six4Q61321 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Six4Q61321 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.7■■□□□ 1.38
Six4Q61321 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Six4Q61321 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Six4Q61321 Gm7432-201ENSMUST00000210343 879 ntBASIC23.7■■□□□ 1.38
Six4Q61321 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Six4Q61321 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.7■■□□□ 1.38
Six4Q61321 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Six4Q61321 Gm37136-201ENSMUST00000194368 194 ntBASIC23.69■■□□□ 1.38
Six4Q61321 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.69■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms