Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Clns1aQ61189 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.99■□□□□ 0.79
Clns1aQ61189 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clns1aQ61189 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clns1aQ61189 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Clns1aQ61189 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Clns1aQ61189 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.98■□□□□ 0.79
Clns1aQ61189 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clns1aQ61189 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clns1aQ61189 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Clns1aQ61189 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clns1aQ61189 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clns1aQ61189 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clns1aQ61189 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.96■□□□□ 0.79
Clns1aQ61189 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Clns1aQ61189 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Clns1aQ61189 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clns1aQ61189 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clns1aQ61189 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clns1aQ61189 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clns1aQ61189 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clns1aQ61189 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clns1aQ61189 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Clns1aQ61189 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clns1aQ61189 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clns1aQ61189 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clns1aQ61189 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clns1aQ61189 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.94■□□□□ 0.78
Clns1aQ61189 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Clns1aQ61189 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Clns1aQ61189 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clns1aQ61189 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clns1aQ61189 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clns1aQ61189 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.93■□□□□ 0.78
Clns1aQ61189 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clns1aQ61189 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Clns1aQ61189 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clns1aQ61189 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clns1aQ61189 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clns1aQ61189 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clns1aQ61189 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clns1aQ61189 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Clns1aQ61189 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Clns1aQ61189 Gm26115-201ENSMUST00000175605 87 ntBASIC19.9■□□□□ 0.78
Clns1aQ61189 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clns1aQ61189 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Clns1aQ61189 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Clns1aQ61189 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clns1aQ61189 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Clns1aQ61189 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Clns1aQ61189 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Clns1aQ61189 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clns1aQ61189 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Clns1aQ61189 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Clns1aQ61189 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clns1aQ61189 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Clns1aQ61189 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clns1aQ61189 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clns1aQ61189 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Clns1aQ61189 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clns1aQ61189 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clns1aQ61189 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Clns1aQ61189 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Clns1aQ61189 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
Clns1aQ61189 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clns1aQ61189 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Clns1aQ61189 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Clns1aQ61189 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clns1aQ61189 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clns1aQ61189 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clns1aQ61189 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Clns1aQ61189 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.81■□□□□ 0.76
Clns1aQ61189 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clns1aQ61189 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Clns1aQ61189 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.8■□□□□ 0.76
Clns1aQ61189 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Clns1aQ61189 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Clns1aQ61189 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clns1aQ61189 Gm8109-201ENSMUST00000194076 746 ntBASIC19.8■□□□□ 0.76
Clns1aQ61189 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clns1aQ61189 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clns1aQ61189 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Clns1aQ61189 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Clns1aQ61189 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Clns1aQ61189 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clns1aQ61189 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Clns1aQ61189 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Clns1aQ61189 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clns1aQ61189 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.78■□□□□ 0.76
Clns1aQ61189 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clns1aQ61189 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clns1aQ61189 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Clns1aQ61189 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clns1aQ61189 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Clns1aQ61189 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clns1aQ61189 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Clns1aQ61189 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Clns1aQ61189 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clns1aQ61189 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.76■□□□□ 0.75
Clns1aQ61189 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms