Protein–RNA interactions for Protein: Q60841

Reln, Reelin, mousemouse

Predictions only

Length 3,461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RelnQ60841 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.54■■□□□ 1.04
RelnQ60841 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RelnQ60841 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RelnQ60841 Gm16437-201ENSMUST00000025669 507 ntBASIC21.53■■□□□ 1.04
RelnQ60841 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
RelnQ60841 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.51■■□□□ 1.03
RelnQ60841 Gm30023-201ENSMUST00000197970 889 ntBASIC21.51■■□□□ 1.03
RelnQ60841 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.51■■□□□ 1.03
RelnQ60841 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.51■■□□□ 1.03
RelnQ60841 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RelnQ60841 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RelnQ60841 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RelnQ60841 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
RelnQ60841 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RelnQ60841 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RelnQ60841 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.49■■□□□ 1.03
RelnQ60841 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RelnQ60841 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RelnQ60841 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RelnQ60841 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.47■■□□□ 1.03
RelnQ60841 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.47■■□□□ 1.03
RelnQ60841 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
RelnQ60841 Gm7332-201ENSMUST00000118351 454 ntBASIC21.47■■□□□ 1.03
RelnQ60841 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RelnQ60841 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
RelnQ60841 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
RelnQ60841 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RelnQ60841 Gm45364-201ENSMUST00000210883 159 ntBASIC21.45■■□□□ 1.02
RelnQ60841 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RelnQ60841 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RelnQ60841 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RelnQ60841 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.44■■□□□ 1.02
RelnQ60841 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RelnQ60841 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RelnQ60841 Gm14523-201ENSMUST00000117260 558 ntBASIC21.4■■□□□ 1.02
RelnQ60841 Serp2-204ENSMUST00000228055 705 ntBASIC21.4■■□□□ 1.02
RelnQ60841 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RelnQ60841 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RelnQ60841 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RelnQ60841 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RelnQ60841 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RelnQ60841 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RelnQ60841 Gm27502-201ENSMUST00000183495 199 ntBASIC21.38■■□□□ 1.01
RelnQ60841 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RelnQ60841 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RelnQ60841 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
RelnQ60841 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RelnQ60841 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
RelnQ60841 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.37■■□□□ 1.01
RelnQ60841 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RelnQ60841 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RelnQ60841 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.36■■□□□ 1.01
RelnQ60841 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RelnQ60841 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RelnQ60841 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RelnQ60841 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.35■■□□□ 1.01
RelnQ60841 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RelnQ60841 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RelnQ60841 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RelnQ60841 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.34■■□□□ 1.01
RelnQ60841 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.33■■□□□ 1.01
RelnQ60841 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
RelnQ60841 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.33■■□□□ 1
RelnQ60841 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
RelnQ60841 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RelnQ60841 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.32■■□□□ 1
RelnQ60841 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RelnQ60841 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
RelnQ60841 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
RelnQ60841 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.31■■□□□ 1
RelnQ60841 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.31■■□□□ 1
RelnQ60841 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.3■■□□□ 1
RelnQ60841 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.3■■□□□ 1
RelnQ60841 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.3■■□□□ 1
RelnQ60841 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.3■■□□□ 1
RelnQ60841 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.3■■□□□ 1
RelnQ60841 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.29■■□□□ 1
RelnQ60841 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
RelnQ60841 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.29■■□□□ 1
RelnQ60841 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RelnQ60841 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RelnQ60841 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RelnQ60841 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.27■■□□□ 1
RelnQ60841 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RelnQ60841 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
RelnQ60841 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RelnQ60841 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.26■□□□□ 0.99
RelnQ60841 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
RelnQ60841 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RelnQ60841 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RelnQ60841 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RelnQ60841 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RelnQ60841 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RelnQ60841 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.24■□□□□ 0.99
RelnQ60841 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RelnQ60841 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RelnQ60841 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RelnQ60841 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RelnQ60841 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RelnQ60841 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 720.2 ms