Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ush2AQ2QI47 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ush2AQ2QI47 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ush2AQ2QI47 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ush2AQ2QI47 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ush2AQ2QI47 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC13.46□□□□□ -0.26
Ush2AQ2QI47 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ush2AQ2QI47 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ush2AQ2QI47 Particl-201ENSMUST00000205370 1560 ntBASIC13.45□□□□□ -0.26
Ush2AQ2QI47 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC13.45□□□□□ -0.26
Ush2AQ2QI47 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ush2AQ2QI47 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ush2AQ2QI47 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ush2AQ2QI47 Pkd1-207ENSMUST00000228550 1050 ntBASIC13.45□□□□□ -0.26
Ush2AQ2QI47 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ush2AQ2QI47 AC151971.4-201ENSMUST00000214717 704 ntBASIC13.44□□□□□ -0.26
Ush2AQ2QI47 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC13.44□□□□□ -0.26
Ush2AQ2QI47 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ush2AQ2QI47 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ush2AQ2QI47 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC13.43□□□□□ -0.26
Ush2AQ2QI47 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ush2AQ2QI47 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Ush2AQ2QI47 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ush2AQ2QI47 Gm10420-201ENSMUST00000121713 882 ntBASIC13.43□□□□□ -0.26
Ush2AQ2QI47 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC13.42□□□□□ -0.26
Ush2AQ2QI47 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ush2AQ2QI47 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ush2AQ2QI47 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC13.42□□□□□ -0.26
Ush2AQ2QI47 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ush2AQ2QI47 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ush2AQ2QI47 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Ush2AQ2QI47 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Ush2AQ2QI47 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC13.41□□□□□ -0.26
Ush2AQ2QI47 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ush2AQ2QI47 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ush2AQ2QI47 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ush2AQ2QI47 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC13.41□□□□□ -0.26
Ush2AQ2QI47 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ush2AQ2QI47 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC13.4□□□□□ -0.26
Ush2AQ2QI47 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC13.4□□□□□ -0.26
Ush2AQ2QI47 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ush2AQ2QI47 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ush2AQ2QI47 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Ush2AQ2QI47 Gm30346-201ENSMUST00000218641 1699 ntBASIC13.39□□□□□ -0.27
Ush2AQ2QI47 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ush2AQ2QI47 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ush2AQ2QI47 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC13.39□□□□□ -0.27
Ush2AQ2QI47 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ush2AQ2QI47 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ush2AQ2QI47 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ush2AQ2QI47 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ush2AQ2QI47 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ush2AQ2QI47 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ush2AQ2QI47 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ush2AQ2QI47 Gm9959-201ENSMUST00000068277 390 ntBASIC13.37□□□□□ -0.27
Ush2AQ2QI47 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ush2AQ2QI47 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ush2AQ2QI47 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ush2AQ2QI47 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Ush2AQ2QI47 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ush2AQ2QI47 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ush2AQ2QI47 AC154454.1-201ENSMUST00000225253 216 ntBASIC13.36□□□□□ -0.27
Ush2AQ2QI47 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ush2AQ2QI47 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ush2AQ2QI47 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ush2AQ2QI47 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ush2AQ2QI47 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ush2AQ2QI47 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC13.34□□□□□ -0.27
Ush2AQ2QI47 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ush2AQ2QI47 Gm13238-201ENSMUST00000117655 780 ntBASIC13.34□□□□□ -0.27
Ush2AQ2QI47 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ush2AQ2QI47 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC13.33□□□□□ -0.27
Ush2AQ2QI47 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC13.33□□□□□ -0.28
Ush2AQ2QI47 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ush2AQ2QI47 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ush2AQ2QI47 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ush2AQ2QI47 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Ush2AQ2QI47 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ush2AQ2QI47 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ush2AQ2QI47 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ush2AQ2QI47 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ush2AQ2QI47 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ush2AQ2QI47 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ush2AQ2QI47 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC13.3□□□□□ -0.28
Ush2AQ2QI47 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ush2AQ2QI47 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ush2AQ2QI47 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC13.3□□□□□ -0.28
Ush2AQ2QI47 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ush2AQ2QI47 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ush2AQ2QI47 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ush2AQ2QI47 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ush2AQ2QI47 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ush2AQ2QI47 Gm45444-201ENSMUST00000211394 898 ntBASIC13.29□□□□□ -0.28
Ush2AQ2QI47 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ush2AQ2QI47 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ush2AQ2QI47 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
Ush2AQ2QI47 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ush2AQ2QI47 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ush2AQ2QI47 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC13.27□□□□□ -0.28
Ush2AQ2QI47 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms