Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.76■■□□□ 1.07
Col10a1Q05306 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Col10a1Q05306 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Col10a1Q05306 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.74■■□□□ 1.07
Col10a1Q05306 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Col10a1Q05306 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.73■■□□□ 1.07
Col10a1Q05306 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Col10a1Q05306 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Col10a1Q05306 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col10a1Q05306 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Col10a1Q05306 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col10a1Q05306 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col10a1Q05306 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.71■■□□□ 1.07
Col10a1Q05306 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Col10a1Q05306 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col10a1Q05306 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Col10a1Q05306 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.69■■□□□ 1.06
Col10a1Q05306 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Col10a1Q05306 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col10a1Q05306 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col10a1Q05306 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Col10a1Q05306 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col10a1Q05306 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Col10a1Q05306 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Col10a1Q05306 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col10a1Q05306 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Col10a1Q05306 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Col10a1Q05306 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Col10a1Q05306 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Col10a1Q05306 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Col10a1Q05306 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Col10a1Q05306 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Col10a1Q05306 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Col10a1Q05306 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col10a1Q05306 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Col10a1Q05306 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Col10a1Q05306 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Col10a1Q05306 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.62■■□□□ 1.05
Col10a1Q05306 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Col10a1Q05306 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Col10a1Q05306 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Col10a1Q05306 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
Col10a1Q05306 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Col10a1Q05306 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Col10a1Q05306 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col10a1Q05306 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col10a1Q05306 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Col10a1Q05306 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.57■■□□□ 1.04
Col10a1Q05306 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col10a1Q05306 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col10a1Q05306 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.56■■□□□ 1.04
Col10a1Q05306 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Col10a1Q05306 Particl-201ENSMUST00000205370 1560 ntBASIC21.56■■□□□ 1.04
Col10a1Q05306 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col10a1Q05306 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Col10a1Q05306 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col10a1Q05306 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col10a1Q05306 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col10a1Q05306 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Col10a1Q05306 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col10a1Q05306 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col10a1Q05306 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.52■■□□□ 1.04
Col10a1Q05306 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.52■■□□□ 1.04
Col10a1Q05306 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Col10a1Q05306 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Col10a1Q05306 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col10a1Q05306 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Col10a1Q05306 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Col10a1Q05306 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Col10a1Q05306 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col10a1Q05306 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.5■■□□□ 1.03
Col10a1Q05306 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col10a1Q05306 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Col10a1Q05306 Gm7432-201ENSMUST00000210343 879 ntBASIC21.49■■□□□ 1.03
Col10a1Q05306 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.49■■□□□ 1.03
Col10a1Q05306 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.49■■□□□ 1.03
Col10a1Q05306 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col10a1Q05306 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col10a1Q05306 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Col10a1Q05306 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col10a1Q05306 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Col10a1Q05306 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Col10a1Q05306 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col10a1Q05306 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col10a1Q05306 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col10a1Q05306 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Col10a1Q05306 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.47■■□□□ 1.03
Col10a1Q05306 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.47■■□□□ 1.03
Col10a1Q05306 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col10a1Q05306 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Col10a1Q05306 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Col10a1Q05306 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col10a1Q05306 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col10a1Q05306 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col10a1Q05306 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col10a1Q05306 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col10a1Q05306 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.43■■□□□ 1.02
Col10a1Q05306 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Col10a1Q05306 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.43■■□□□ 1.02
Col10a1Q05306 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 117.2 ms