Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pfn1P62962 Peli2-204ENSMUST00000226513 1320 ntBASIC18.25■□□□□ 0.51
Pfn1P62962 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pfn1P62962 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pfn1P62962 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pfn1P62962 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pfn1P62962 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pfn1P62962 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pfn1P62962 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pfn1P62962 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pfn1P62962 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pfn1P62962 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pfn1P62962 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pfn1P62962 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Pfn1P62962 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pfn1P62962 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pfn1P62962 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pfn1P62962 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pfn1P62962 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pfn1P62962 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Pfn1P62962 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pfn1P62962 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pfn1P62962 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Pfn1P62962 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pfn1P62962 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.21■□□□□ 0.51
Pfn1P62962 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pfn1P62962 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Pfn1P62962 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pfn1P62962 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pfn1P62962 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Pfn1P62962 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.2■□□□□ 0.5
Pfn1P62962 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pfn1P62962 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pfn1P62962 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Pfn1P62962 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.19■□□□□ 0.5
Pfn1P62962 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pfn1P62962 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pfn1P62962 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Pfn1P62962 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pfn1P62962 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pfn1P62962 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Pfn1P62962 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pfn1P62962 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pfn1P62962 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pfn1P62962 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pfn1P62962 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pfn1P62962 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pfn1P62962 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pfn1P62962 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pfn1P62962 Gm26115-201ENSMUST00000175605 87 ntBASIC18.14■□□□□ 0.49
Pfn1P62962 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pfn1P62962 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pfn1P62962 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Pfn1P62962 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pfn1P62962 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pfn1P62962 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pfn1P62962 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pfn1P62962 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pfn1P62962 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pfn1P62962 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Pfn1P62962 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pfn1P62962 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pfn1P62962 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Pfn1P62962 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pfn1P62962 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pfn1P62962 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
Pfn1P62962 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Pfn1P62962 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.1■□□□□ 0.49
Pfn1P62962 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Pfn1P62962 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pfn1P62962 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pfn1P62962 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pfn1P62962 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.09■□□□□ 0.49
Pfn1P62962 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Pfn1P62962 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pfn1P62962 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pfn1P62962 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
Pfn1P62962 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pfn1P62962 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pfn1P62962 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pfn1P62962 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pfn1P62962 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pfn1P62962 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pfn1P62962 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pfn1P62962 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pfn1P62962 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pfn1P62962 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Pfn1P62962 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pfn1P62962 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pfn1P62962 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Pfn1P62962 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pfn1P62962 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pfn1P62962 Gm8109-201ENSMUST00000194076 746 ntBASIC18.05■□□□□ 0.48
Pfn1P62962 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pfn1P62962 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pfn1P62962 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pfn1P62962 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pfn1P62962 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pfn1P62962 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.03■□□□□ 0.48
Pfn1P62962 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms