Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cops3O88543 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cops3O88543 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cops3O88543 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cops3O88543 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cops3O88543 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.94■□□□□ 0.94
Cops3O88543 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.94■□□□□ 0.94
Cops3O88543 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.94■□□□□ 0.94
Cops3O88543 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cops3O88543 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cops3O88543 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cops3O88543 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cops3O88543 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cops3O88543 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.91■□□□□ 0.94
Cops3O88543 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cops3O88543 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cops3O88543 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cops3O88543 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cops3O88543 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Cops3O88543 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cops3O88543 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.9■□□□□ 0.94
Cops3O88543 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cops3O88543 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cops3O88543 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cops3O88543 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.89■□□□□ 0.94
Cops3O88543 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
Cops3O88543 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cops3O88543 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cops3O88543 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.88■□□□□ 0.93
Cops3O88543 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.88■□□□□ 0.93
Cops3O88543 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Cops3O88543 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cops3O88543 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cops3O88543 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cops3O88543 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cops3O88543 Gm9397-201ENSMUST00000200125 605 ntBASIC20.87■□□□□ 0.93
Cops3O88543 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Cops3O88543 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.87■□□□□ 0.93
Cops3O88543 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Cops3O88543 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.85■□□□□ 0.93
Cops3O88543 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cops3O88543 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cops3O88543 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.85■□□□□ 0.93
Cops3O88543 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cops3O88543 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cops3O88543 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cops3O88543 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cops3O88543 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cops3O88543 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cops3O88543 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cops3O88543 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Cops3O88543 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cops3O88543 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cops3O88543 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Cops3O88543 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.83■□□□□ 0.92
Cops3O88543 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cops3O88543 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cops3O88543 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cops3O88543 Gm24970-201ENSMUST00000175582 82 ntBASIC20.82■□□□□ 0.92
Cops3O88543 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cops3O88543 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cops3O88543 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cops3O88543 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cops3O88543 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cops3O88543 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cops3O88543 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cops3O88543 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cops3O88543 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cops3O88543 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cops3O88543 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Cops3O88543 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cops3O88543 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cops3O88543 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Cops3O88543 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cops3O88543 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cops3O88543 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cops3O88543 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cops3O88543 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cops3O88543 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cops3O88543 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Cops3O88543 Gm30023-201ENSMUST00000197970 889 ntBASIC20.77■□□□□ 0.92
Cops3O88543 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cops3O88543 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.77■□□□□ 0.92
Cops3O88543 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cops3O88543 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Cops3O88543 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cops3O88543 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Cops3O88543 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cops3O88543 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cops3O88543 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.74■□□□□ 0.91
Cops3O88543 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cops3O88543 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cops3O88543 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cops3O88543 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.73■□□□□ 0.91
Cops3O88543 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cops3O88543 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cops3O88543 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cops3O88543 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cops3O88543 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
Cops3O88543 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms