Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prrt1O35449 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Prrt1O35449 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.83■□□□□ 0.77
Prrt1O35449 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prrt1O35449 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prrt1O35449 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Prrt1O35449 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Prrt1O35449 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Prrt1O35449 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Prrt1O35449 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Prrt1O35449 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.83■□□□□ 0.76
Prrt1O35449 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prrt1O35449 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prrt1O35449 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Prrt1O35449 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prrt1O35449 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Prrt1O35449 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prrt1O35449 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prrt1O35449 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prrt1O35449 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prrt1O35449 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Prrt1O35449 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prrt1O35449 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prrt1O35449 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Prrt1O35449 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prrt1O35449 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Prrt1O35449 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Prrt1O35449 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prrt1O35449 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Prrt1O35449 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.79■□□□□ 0.76
Prrt1O35449 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prrt1O35449 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Prrt1O35449 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Prrt1O35449 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prrt1O35449 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Prrt1O35449 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prrt1O35449 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Prrt1O35449 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Prrt1O35449 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Prrt1O35449 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Prrt1O35449 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Prrt1O35449 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prrt1O35449 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Prrt1O35449 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Prrt1O35449 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prrt1O35449 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prrt1O35449 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prrt1O35449 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prrt1O35449 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
Prrt1O35449 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Prrt1O35449 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prrt1O35449 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prrt1O35449 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prrt1O35449 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Prrt1O35449 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
Prrt1O35449 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.74■□□□□ 0.75
Prrt1O35449 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.73■□□□□ 0.75
Prrt1O35449 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Prrt1O35449 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prrt1O35449 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prrt1O35449 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Prrt1O35449 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Prrt1O35449 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prrt1O35449 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prrt1O35449 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.72■□□□□ 0.75
Prrt1O35449 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prrt1O35449 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Prrt1O35449 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Prrt1O35449 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prrt1O35449 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Prrt1O35449 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prrt1O35449 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Prrt1O35449 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.7■□□□□ 0.74
Prrt1O35449 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prrt1O35449 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prrt1O35449 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Prrt1O35449 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.69■□□□□ 0.74
Prrt1O35449 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Prrt1O35449 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Prrt1O35449 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.68■□□□□ 0.74
Prrt1O35449 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prrt1O35449 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prrt1O35449 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prrt1O35449 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prrt1O35449 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prrt1O35449 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Prrt1O35449 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prrt1O35449 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prrt1O35449 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prrt1O35449 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prrt1O35449 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Prrt1O35449 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Prrt1O35449 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Prrt1O35449 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prrt1O35449 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Prrt1O35449 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Prrt1O35449 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Prrt1O35449 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Prrt1O35449 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Prrt1O35449 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms