Protein–RNA interactions for Protein: J3QQ23

Gm21310, Predicted gene, 21310, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21310J3QQ23 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm21310J3QQ23 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm21310J3QQ23 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm21310J3QQ23 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm21310J3QQ23 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gm21310J3QQ23 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm21310J3QQ23 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Gm21310J3QQ23 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.53■□□□□ 0.56
Gm21310J3QQ23 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Gm21310J3QQ23 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Gm21310J3QQ23 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gm21310J3QQ23 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Gm21310J3QQ23 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Gm21310J3QQ23 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Gm21310J3QQ23 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm21310J3QQ23 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm21310J3QQ23 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Gm21310J3QQ23 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm21310J3QQ23 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Gm21310J3QQ23 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Gm21310J3QQ23 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Gm21310J3QQ23 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gm21310J3QQ23 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gm21310J3QQ23 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gm21310J3QQ23 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gm21310J3QQ23 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm21310J3QQ23 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm21310J3QQ23 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm21310J3QQ23 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm21310J3QQ23 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm21310J3QQ23 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm21310J3QQ23 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm21310J3QQ23 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm21310J3QQ23 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.49■□□□□ 0.55
Gm21310J3QQ23 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm21310J3QQ23 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Gm21310J3QQ23 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Gm21310J3QQ23 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Gm21310J3QQ23 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Gm21310J3QQ23 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm21310J3QQ23 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Gm21310J3QQ23 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm21310J3QQ23 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Gm21310J3QQ23 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.48■□□□□ 0.55
Gm21310J3QQ23 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.47■□□□□ 0.55
Gm21310J3QQ23 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm21310J3QQ23 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Gm21310J3QQ23 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm21310J3QQ23 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm21310J3QQ23 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm21310J3QQ23 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm21310J3QQ23 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm21310J3QQ23 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm21310J3QQ23 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Gm21310J3QQ23 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm21310J3QQ23 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm21310J3QQ23 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Gm21310J3QQ23 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.44■□□□□ 0.54
Gm21310J3QQ23 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm21310J3QQ23 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm21310J3QQ23 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.42■□□□□ 0.54
Gm21310J3QQ23 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm21310J3QQ23 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gm21310J3QQ23 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.42■□□□□ 0.54
Gm21310J3QQ23 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gm21310J3QQ23 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Gm21310J3QQ23 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm21310J3QQ23 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm21310J3QQ23 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Gm21310J3QQ23 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm21310J3QQ23 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm21310J3QQ23 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Gm21310J3QQ23 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm21310J3QQ23 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm21310J3QQ23 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Gm21310J3QQ23 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Gm21310J3QQ23 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Gm21310J3QQ23 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Gm21310J3QQ23 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.39■□□□□ 0.53
Gm21310J3QQ23 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm21310J3QQ23 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm21310J3QQ23 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Gm21310J3QQ23 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm21310J3QQ23 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm21310J3QQ23 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm21310J3QQ23 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm21310J3QQ23 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm21310J3QQ23 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm21310J3QQ23 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gm21310J3QQ23 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Gm21310J3QQ23 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm21310J3QQ23 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm21310J3QQ23 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm21310J3QQ23 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm21310J3QQ23 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm21310J3QQ23 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
Gm21310J3QQ23 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm21310J3QQ23 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Gm21310J3QQ23 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm21310J3QQ23 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms