Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Herc1E9PZP8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Herc1E9PZP8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Herc1E9PZP8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Herc1E9PZP8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Herc1E9PZP8 Gm10420-201ENSMUST00000121713 882 ntBASIC14.15□□□□□ -0.14
Herc1E9PZP8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC14.14□□□□□ -0.15
Herc1E9PZP8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Herc1E9PZP8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Herc1E9PZP8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Herc1E9PZP8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Herc1E9PZP8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Herc1E9PZP8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Herc1E9PZP8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Herc1E9PZP8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Herc1E9PZP8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.13□□□□□ -0.15
Herc1E9PZP8 Gm9959-201ENSMUST00000068277 390 ntBASIC14.13□□□□□ -0.15
Herc1E9PZP8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Herc1E9PZP8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Herc1E9PZP8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Herc1E9PZP8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Herc1E9PZP8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC14.11□□□□□ -0.15
Herc1E9PZP8 AC154454.1-201ENSMUST00000225253 216 ntBASIC14.11□□□□□ -0.15
Herc1E9PZP8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Herc1E9PZP8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Herc1E9PZP8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Herc1E9PZP8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Herc1E9PZP8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Herc1E9PZP8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Herc1E9PZP8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC14.1□□□□□ -0.15
Herc1E9PZP8 Gm45364-201ENSMUST00000210883 159 ntBASIC14.1□□□□□ -0.15
Herc1E9PZP8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Herc1E9PZP8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC14.1□□□□□ -0.15
Herc1E9PZP8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Herc1E9PZP8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Herc1E9PZP8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14.09□□□□□ -0.15
Herc1E9PZP8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Herc1E9PZP8 Gm13238-201ENSMUST00000117655 780 ntBASIC14.09□□□□□ -0.15
Herc1E9PZP8 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Herc1E9PZP8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
Herc1E9PZP8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC14.09□□□□□ -0.15
Herc1E9PZP8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Herc1E9PZP8 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Herc1E9PZP8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Herc1E9PZP8 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Herc1E9PZP8 AC151971.4-201ENSMUST00000214717 704 ntBASIC14.08□□□□□ -0.16
Herc1E9PZP8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Herc1E9PZP8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Herc1E9PZP8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC14.08□□□□□ -0.16
Herc1E9PZP8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Herc1E9PZP8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Herc1E9PZP8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Herc1E9PZP8 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Herc1E9PZP8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Herc1E9PZP8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Herc1E9PZP8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Herc1E9PZP8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Herc1E9PZP8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Herc1E9PZP8 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Herc1E9PZP8 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.05□□□□□ -0.16
Herc1E9PZP8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC14.05□□□□□ -0.16
Herc1E9PZP8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Herc1E9PZP8 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Herc1E9PZP8 Pkd1-207ENSMUST00000228550 1050 ntBASIC14.05□□□□□ -0.16
Herc1E9PZP8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Herc1E9PZP8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Herc1E9PZP8 Particl-201ENSMUST00000205370 1560 ntBASIC14.04□□□□□ -0.16
Herc1E9PZP8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Herc1E9PZP8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Herc1E9PZP8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Herc1E9PZP8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Herc1E9PZP8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Herc1E9PZP8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Herc1E9PZP8 Gm45444-201ENSMUST00000211394 898 ntBASIC14.03□□□□□ -0.16
Herc1E9PZP8 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.03□□□□□ -0.16
Herc1E9PZP8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Herc1E9PZP8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC14.02□□□□□ -0.16
Herc1E9PZP8 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC14.02□□□□□ -0.17
Herc1E9PZP8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Herc1E9PZP8 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Herc1E9PZP8 Gm29257-201ENSMUST00000186115 639 ntBASIC14.01□□□□□ -0.17
Herc1E9PZP8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Herc1E9PZP8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Herc1E9PZP8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14□□□□□ -0.17
Herc1E9PZP8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC14□□□□□ -0.17
Herc1E9PZP8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Herc1E9PZP8 Gm30346-201ENSMUST00000218641 1699 ntBASIC14□□□□□ -0.17
Herc1E9PZP8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC13.99□□□□□ -0.17
Herc1E9PZP8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Herc1E9PZP8 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Herc1E9PZP8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Herc1E9PZP8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Herc1E9PZP8 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Herc1E9PZP8 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Herc1E9PZP8 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.98□□□□□ -0.17
Herc1E9PZP8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Herc1E9PZP8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Herc1E9PZP8 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Herc1E9PZP8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC13.97□□□□□ -0.17
Herc1E9PZP8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 141.4 ms