Protein–RNA interactions for Protein: E9PY62

Cntnap3, Contactin-associated protein-like 3, mousemouse

Predictions only

Length 1,287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap3E9PY62 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Cntnap3E9PY62 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cntnap3E9PY62 AC093043.1-201ENSMUST00000226700 898 ntBASIC26.68■■□□□ 1.86
Cntnap3E9PY62 Gm5522-201ENSMUST00000189483 1242 ntBASIC26.67■■□□□ 1.86
Cntnap3E9PY62 AC154454.1-201ENSMUST00000225253 216 ntBASIC26.67■■□□□ 1.86
Cntnap3E9PY62 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC26.66■■□□□ 1.86
Cntnap3E9PY62 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC26.66■■□□□ 1.86
Cntnap3E9PY62 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Cntnap3E9PY62 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
Cntnap3E9PY62 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
Cntnap3E9PY62 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC26.63■■□□□ 1.85
Cntnap3E9PY62 Mir3960-201ENSMUST00000198213 73 ntBASIC26.63■■□□□ 1.85
Cntnap3E9PY62 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC26.62■■□□□ 1.85
Cntnap3E9PY62 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Cntnap3E9PY62 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Cntnap3E9PY62 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Cntnap3E9PY62 Gm45364-201ENSMUST00000210883 159 ntBASIC26.61■■□□□ 1.85
Cntnap3E9PY62 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
Cntnap3E9PY62 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cntnap3E9PY62 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
Cntnap3E9PY62 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC26.6■■□□□ 1.85
Cntnap3E9PY62 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC26.59■■□□□ 1.85
Cntnap3E9PY62 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Cntnap3E9PY62 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Cntnap3E9PY62 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Cntnap3E9PY62 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Cntnap3E9PY62 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Cntnap3E9PY62 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
Cntnap3E9PY62 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
Cntnap3E9PY62 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Cntnap3E9PY62 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC26.57■■□□□ 1.84
Cntnap3E9PY62 Gm30023-201ENSMUST00000197970 889 ntBASIC26.57■■□□□ 1.84
Cntnap3E9PY62 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Cntnap3E9PY62 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Cntnap3E9PY62 Gm10420-201ENSMUST00000121713 882 ntBASIC26.56■■□□□ 1.84
Cntnap3E9PY62 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Cntnap3E9PY62 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Cntnap3E9PY62 Rps24-207ENSMUST00000224568 714 ntBASIC26.55■■□□□ 1.84
Cntnap3E9PY62 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Cntnap3E9PY62 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Cntnap3E9PY62 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC26.54■■□□□ 1.84
Cntnap3E9PY62 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC26.54■■□□□ 1.84
Cntnap3E9PY62 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cntnap3E9PY62 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cntnap3E9PY62 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cntnap3E9PY62 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Cntnap3E9PY62 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Cntnap3E9PY62 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
Cntnap3E9PY62 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC26.51■■□□□ 1.83
Cntnap3E9PY62 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Cntnap3E9PY62 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Cntnap3E9PY62 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Cntnap3E9PY62 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
Cntnap3E9PY62 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Cntnap3E9PY62 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC26.49■■□□□ 1.83
Cntnap3E9PY62 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
Cntnap3E9PY62 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Cntnap3E9PY62 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC26.48■■□□□ 1.83
Cntnap3E9PY62 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Cntnap3E9PY62 Serp2-204ENSMUST00000228055 705 ntBASIC26.47■■□□□ 1.83
Cntnap3E9PY62 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Cntnap3E9PY62 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Cntnap3E9PY62 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Cntnap3E9PY62 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC26.46■■□□□ 1.83
Cntnap3E9PY62 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC26.46■■□□□ 1.83
Cntnap3E9PY62 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
Cntnap3E9PY62 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Cntnap3E9PY62 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.46■■□□□ 1.83
Cntnap3E9PY62 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Cntnap3E9PY62 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC26.44■■□□□ 1.82
Cntnap3E9PY62 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Cntnap3E9PY62 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
Cntnap3E9PY62 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
Cntnap3E9PY62 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Cntnap3E9PY62 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Cntnap3E9PY62 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC26.41■■□□□ 1.82
Cntnap3E9PY62 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Cntnap3E9PY62 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Cntnap3E9PY62 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
Cntnap3E9PY62 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Cntnap3E9PY62 Gm5297-201ENSMUST00000198555 1171 ntBASIC26.4■■□□□ 1.82
Cntnap3E9PY62 AC151971.4-201ENSMUST00000214717 704 ntBASIC26.4■■□□□ 1.82
Cntnap3E9PY62 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Cntnap3E9PY62 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC26.39■■□□□ 1.82
Cntnap3E9PY62 Gm15820-201ENSMUST00000201566 728 ntBASIC26.38■■□□□ 1.81
Cntnap3E9PY62 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Cntnap3E9PY62 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Cntnap3E9PY62 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Cntnap3E9PY62 Gm45102-201ENSMUST00000207427 857 ntBASIC26.36■■□□□ 1.81
Cntnap3E9PY62 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Cntnap3E9PY62 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Cntnap3E9PY62 Gm14117-201ENSMUST00000122417 843 ntBASIC26.35■■□□□ 1.81
Cntnap3E9PY62 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC26.35■■□□□ 1.81
Cntnap3E9PY62 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC26.35■■□□□ 1.81
Cntnap3E9PY62 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC26.35■■□□□ 1.81
Cntnap3E9PY62 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Cntnap3E9PY62 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Cntnap3E9PY62 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
Cntnap3E9PY62 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
Cntnap3E9PY62 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms