Protein–RNA interactions for Protein: B1AUS7

Ssxa1, Protein SSXA1, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssxa1B1AUS7 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Ssxa1B1AUS7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ssxa1B1AUS7 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ssxa1B1AUS7 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Ssxa1B1AUS7 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Ssxa1B1AUS7 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Ssxa1B1AUS7 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Ssxa1B1AUS7 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.5■■□□□ 1.19
Ssxa1B1AUS7 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Ssxa1B1AUS7 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.5■■□□□ 1.19
Ssxa1B1AUS7 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ssxa1B1AUS7 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ssxa1B1AUS7 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.49■■□□□ 1.19
Ssxa1B1AUS7 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ssxa1B1AUS7 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Ssxa1B1AUS7 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ssxa1B1AUS7 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ssxa1B1AUS7 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Ssxa1B1AUS7 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ssxa1B1AUS7 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.47■■□□□ 1.19
Ssxa1B1AUS7 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ssxa1B1AUS7 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ssxa1B1AUS7 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Ssxa1B1AUS7 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
Ssxa1B1AUS7 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ssxa1B1AUS7 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
Ssxa1B1AUS7 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ssxa1B1AUS7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.43■■□□□ 1.18
Ssxa1B1AUS7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ssxa1B1AUS7 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Ssxa1B1AUS7 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ssxa1B1AUS7 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Ssxa1B1AUS7 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ssxa1B1AUS7 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ssxa1B1AUS7 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ssxa1B1AUS7 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Ssxa1B1AUS7 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ssxa1B1AUS7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.39■■□□□ 1.18
Ssxa1B1AUS7 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Ssxa1B1AUS7 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Ssxa1B1AUS7 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ssxa1B1AUS7 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ssxa1B1AUS7 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ssxa1B1AUS7 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ssxa1B1AUS7 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ssxa1B1AUS7 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ssxa1B1AUS7 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ssxa1B1AUS7 Particl-201ENSMUST00000205370 1560 ntBASIC22.37■■□□□ 1.17
Ssxa1B1AUS7 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ssxa1B1AUS7 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ssxa1B1AUS7 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ssxa1B1AUS7 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Ssxa1B1AUS7 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Ssxa1B1AUS7 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ssxa1B1AUS7 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ssxa1B1AUS7 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ssxa1B1AUS7 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.34■■□□□ 1.17
Ssxa1B1AUS7 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.34■■□□□ 1.17
Ssxa1B1AUS7 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ssxa1B1AUS7 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ssxa1B1AUS7 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ssxa1B1AUS7 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Ssxa1B1AUS7 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Ssxa1B1AUS7 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Ssxa1B1AUS7 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Ssxa1B1AUS7 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Ssxa1B1AUS7 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Ssxa1B1AUS7 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Ssxa1B1AUS7 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Ssxa1B1AUS7 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ssxa1B1AUS7 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ssxa1B1AUS7 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ssxa1B1AUS7 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Ssxa1B1AUS7 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Ssxa1B1AUS7 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Ssxa1B1AUS7 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.29■■□□□ 1.16
Ssxa1B1AUS7 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.29■■□□□ 1.16
Ssxa1B1AUS7 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ssxa1B1AUS7 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.28■■□□□ 1.16
Ssxa1B1AUS7 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.27■■□□□ 1.16
Ssxa1B1AUS7 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ssxa1B1AUS7 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Ssxa1B1AUS7 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.26■■□□□ 1.15
Ssxa1B1AUS7 Gm7432-201ENSMUST00000210343 879 ntBASIC22.26■■□□□ 1.15
Ssxa1B1AUS7 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Ssxa1B1AUS7 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ssxa1B1AUS7 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ssxa1B1AUS7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ssxa1B1AUS7 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.25■■□□□ 1.15
Ssxa1B1AUS7 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ssxa1B1AUS7 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ssxa1B1AUS7 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ssxa1B1AUS7 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Ssxa1B1AUS7 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Ssxa1B1AUS7 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ssxa1B1AUS7 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.23■■□□□ 1.15
Ssxa1B1AUS7 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ssxa1B1AUS7 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.23■■□□□ 1.15
Ssxa1B1AUS7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ssxa1B1AUS7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms