Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
IsxA1A546 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
IsxA1A546 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
IsxA1A546 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
IsxA1A546 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
IsxA1A546 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
IsxA1A546 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
IsxA1A546 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
IsxA1A546 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
IsxA1A546 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.83■■□□□ 1.09
IsxA1A546 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
IsxA1A546 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
IsxA1A546 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
IsxA1A546 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
IsxA1A546 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
IsxA1A546 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
IsxA1A546 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
IsxA1A546 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
IsxA1A546 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
IsxA1A546 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
IsxA1A546 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
IsxA1A546 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
IsxA1A546 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
IsxA1A546 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
IsxA1A546 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
IsxA1A546 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.79■■□□□ 1.08
IsxA1A546 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.78■■□□□ 1.08
IsxA1A546 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
IsxA1A546 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
IsxA1A546 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
IsxA1A546 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
IsxA1A546 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
IsxA1A546 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
IsxA1A546 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
IsxA1A546 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
IsxA1A546 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
IsxA1A546 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
IsxA1A546 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
IsxA1A546 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
IsxA1A546 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
IsxA1A546 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
IsxA1A546 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
IsxA1A546 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
IsxA1A546 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
IsxA1A546 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
IsxA1A546 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
IsxA1A546 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
IsxA1A546 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
IsxA1A546 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
IsxA1A546 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
IsxA1A546 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
IsxA1A546 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
IsxA1A546 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
IsxA1A546 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
IsxA1A546 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
IsxA1A546 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
IsxA1A546 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
IsxA1A546 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
IsxA1A546 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
IsxA1A546 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.7■■□□□ 1.06
IsxA1A546 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
IsxA1A546 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
IsxA1A546 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
IsxA1A546 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
IsxA1A546 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
IsxA1A546 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
IsxA1A546 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
IsxA1A546 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
IsxA1A546 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
IsxA1A546 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
IsxA1A546 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
IsxA1A546 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
IsxA1A546 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.67■■□□□ 1.06
IsxA1A546 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
IsxA1A546 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
IsxA1A546 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
IsxA1A546 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
IsxA1A546 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
IsxA1A546 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
IsxA1A546 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
IsxA1A546 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
IsxA1A546 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.66■■□□□ 1.06
IsxA1A546 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
IsxA1A546 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
IsxA1A546 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
IsxA1A546 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
IsxA1A546 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
IsxA1A546 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
IsxA1A546 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
IsxA1A546 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
IsxA1A546 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
IsxA1A546 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
IsxA1A546 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
IsxA1A546 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
IsxA1A546 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
IsxA1A546 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
IsxA1A546 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
IsxA1A546 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
IsxA1A546 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
IsxA1A546 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms