Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.59■□□□□ 0.73
Lnp1A0A1B0GSK3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lnp1A0A1B0GSK3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lnp1A0A1B0GSK3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Lnp1A0A1B0GSK3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.58■□□□□ 0.73
Lnp1A0A1B0GSK3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
Lnp1A0A1B0GSK3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
Lnp1A0A1B0GSK3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lnp1A0A1B0GSK3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lnp1A0A1B0GSK3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lnp1A0A1B0GSK3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Lnp1A0A1B0GSK3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lnp1A0A1B0GSK3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lnp1A0A1B0GSK3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lnp1A0A1B0GSK3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lnp1A0A1B0GSK3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lnp1A0A1B0GSK3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lnp1A0A1B0GSK3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lnp1A0A1B0GSK3 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.55■□□□□ 0.72
Lnp1A0A1B0GSK3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lnp1A0A1B0GSK3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Lnp1A0A1B0GSK3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.54■□□□□ 0.72
Lnp1A0A1B0GSK3 Nkain2-201ENSMUST00000092602 558 ntBASIC19.54■□□□□ 0.72
Lnp1A0A1B0GSK3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.54■□□□□ 0.72
Lnp1A0A1B0GSK3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Lnp1A0A1B0GSK3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Lnp1A0A1B0GSK3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.53■□□□□ 0.72
Lnp1A0A1B0GSK3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.53■□□□□ 0.72
Lnp1A0A1B0GSK3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Lnp1A0A1B0GSK3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.52■□□□□ 0.72
Lnp1A0A1B0GSK3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Lnp1A0A1B0GSK3 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.52■□□□□ 0.72
Lnp1A0A1B0GSK3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Lnp1A0A1B0GSK3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Lnp1A0A1B0GSK3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Lnp1A0A1B0GSK3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.51■□□□□ 0.71
Lnp1A0A1B0GSK3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Lnp1A0A1B0GSK3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lnp1A0A1B0GSK3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lnp1A0A1B0GSK3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Lnp1A0A1B0GSK3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
Lnp1A0A1B0GSK3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Lnp1A0A1B0GSK3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.49■□□□□ 0.71
Lnp1A0A1B0GSK3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.49■□□□□ 0.71
Lnp1A0A1B0GSK3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Lnp1A0A1B0GSK3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lnp1A0A1B0GSK3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lnp1A0A1B0GSK3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lnp1A0A1B0GSK3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.47■□□□□ 0.71
Lnp1A0A1B0GSK3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Lnp1A0A1B0GSK3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lnp1A0A1B0GSK3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lnp1A0A1B0GSK3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lnp1A0A1B0GSK3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lnp1A0A1B0GSK3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.45■□□□□ 0.7
Lnp1A0A1B0GSK3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lnp1A0A1B0GSK3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.44■□□□□ 0.7
Lnp1A0A1B0GSK3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lnp1A0A1B0GSK3 Gm6821-201ENSMUST00000107540 542 ntBASIC19.44■□□□□ 0.7
Lnp1A0A1B0GSK3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lnp1A0A1B0GSK3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Lnp1A0A1B0GSK3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lnp1A0A1B0GSK3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lnp1A0A1B0GSK3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Lnp1A0A1B0GSK3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Lnp1A0A1B0GSK3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.39■□□□□ 0.69
Lnp1A0A1B0GSK3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lnp1A0A1B0GSK3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lnp1A0A1B0GSK3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lnp1A0A1B0GSK3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.38■□□□□ 0.69
Lnp1A0A1B0GSK3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.37■□□□□ 0.69
Lnp1A0A1B0GSK3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lnp1A0A1B0GSK3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.36■□□□□ 0.69
Lnp1A0A1B0GSK3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lnp1A0A1B0GSK3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lnp1A0A1B0GSK3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lnp1A0A1B0GSK3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lnp1A0A1B0GSK3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.35■□□□□ 0.69
Lnp1A0A1B0GSK3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lnp1A0A1B0GSK3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lnp1A0A1B0GSK3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Lnp1A0A1B0GSK3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Lnp1A0A1B0GSK3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lnp1A0A1B0GSK3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lnp1A0A1B0GSK3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lnp1A0A1B0GSK3 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.34■□□□□ 0.69
Lnp1A0A1B0GSK3 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.34■□□□□ 0.69
Lnp1A0A1B0GSK3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lnp1A0A1B0GSK3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.33■□□□□ 0.68
Lnp1A0A1B0GSK3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.33■□□□□ 0.68
Lnp1A0A1B0GSK3 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Lnp1A0A1B0GSK3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lnp1A0A1B0GSK3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lnp1A0A1B0GSK3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lnp1A0A1B0GSK3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lnp1A0A1B0GSK3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lnp1A0A1B0GSK3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lnp1A0A1B0GSK3 Gm8503-201ENSMUST00000118131 455 ntBASIC19.31■□□□□ 0.68
Lnp1A0A1B0GSK3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.31■□□□□ 0.68
Lnp1A0A1B0GSK3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms