Protein–RNA interactions for Protein: A0A140T8M7

Rpl23a-ps3, Ribosomal protein L23A, pseudogene 3, mousemouse

Predictions only

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl23a-ps3A0A140T8M7 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.45■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.43■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.42■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.41■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.41■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.4■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.35■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.35■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.33■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.32■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms