Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv29A0A0G2LB96 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv29A0A0G2LB96 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Trbv29A0A0G2LB96 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv29A0A0G2LB96 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.53■□□□□ 0.72
Trbv29A0A0G2LB96 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trbv29A0A0G2LB96 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trbv29A0A0G2LB96 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Trbv29A0A0G2LB96 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trbv29A0A0G2LB96 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Trbv29A0A0G2LB96 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Trbv29A0A0G2LB96 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv29A0A0G2LB96 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.51■□□□□ 0.71
Trbv29A0A0G2LB96 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv29A0A0G2LB96 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv29A0A0G2LB96 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv29A0A0G2LB96 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv29A0A0G2LB96 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv29A0A0G2LB96 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv29A0A0G2LB96 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.49■□□□□ 0.71
Trbv29A0A0G2LB96 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv29A0A0G2LB96 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv29A0A0G2LB96 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv29A0A0G2LB96 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv29A0A0G2LB96 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv29A0A0G2LB96 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv29A0A0G2LB96 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv29A0A0G2LB96 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv29A0A0G2LB96 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv29A0A0G2LB96 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.46■□□□□ 0.71
Trbv29A0A0G2LB96 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.46■□□□□ 0.71
Trbv29A0A0G2LB96 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv29A0A0G2LB96 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Trbv29A0A0G2LB96 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv29A0A0G2LB96 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv29A0A0G2LB96 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv29A0A0G2LB96 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv29A0A0G2LB96 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv29A0A0G2LB96 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.44■□□□□ 0.7
Trbv29A0A0G2LB96 Zfp131-205ENSMUST00000223812 663 ntBASIC19.44■□□□□ 0.7
Trbv29A0A0G2LB96 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv29A0A0G2LB96 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv29A0A0G2LB96 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv29A0A0G2LB96 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.43■□□□□ 0.7
Trbv29A0A0G2LB96 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv29A0A0G2LB96 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv29A0A0G2LB96 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv29A0A0G2LB96 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.42■□□□□ 0.7
Trbv29A0A0G2LB96 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.42■□□□□ 0.7
Trbv29A0A0G2LB96 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trbv29A0A0G2LB96 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trbv29A0A0G2LB96 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Trbv29A0A0G2LB96 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trbv29A0A0G2LB96 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv29A0A0G2LB96 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv29A0A0G2LB96 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv29A0A0G2LB96 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Trbv29A0A0G2LB96 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Trbv29A0A0G2LB96 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv29A0A0G2LB96 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv29A0A0G2LB96 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv29A0A0G2LB96 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv29A0A0G2LB96 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.39■□□□□ 0.69
Trbv29A0A0G2LB96 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.39■□□□□ 0.69
Trbv29A0A0G2LB96 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Trbv29A0A0G2LB96 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trbv29A0A0G2LB96 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trbv29A0A0G2LB96 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.38■□□□□ 0.69
Trbv29A0A0G2LB96 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trbv29A0A0G2LB96 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trbv29A0A0G2LB96 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trbv29A0A0G2LB96 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trbv29A0A0G2LB96 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trbv29A0A0G2LB96 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trbv29A0A0G2LB96 Gm24970-201ENSMUST00000175582 82 ntBASIC19.36■□□□□ 0.69
Trbv29A0A0G2LB96 Gm9397-201ENSMUST00000200125 605 ntBASIC19.35■□□□□ 0.69
Trbv29A0A0G2LB96 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.35■□□□□ 0.69
Trbv29A0A0G2LB96 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.35■□□□□ 0.69
Trbv29A0A0G2LB96 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Trbv29A0A0G2LB96 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv29A0A0G2LB96 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv29A0A0G2LB96 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Trbv29A0A0G2LB96 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv29A0A0G2LB96 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv29A0A0G2LB96 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv29A0A0G2LB96 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trbv29A0A0G2LB96 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trbv29A0A0G2LB96 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Trbv29A0A0G2LB96 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trbv29A0A0G2LB96 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.33■□□□□ 0.68
Trbv29A0A0G2LB96 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.32■□□□□ 0.68
Trbv29A0A0G2LB96 Particl-201ENSMUST00000205370 1560 ntBASIC19.32■□□□□ 0.68
Trbv29A0A0G2LB96 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Trbv29A0A0G2LB96 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.32■□□□□ 0.68
Trbv29A0A0G2LB96 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trbv29A0A0G2LB96 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trbv29A0A0G2LB96 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.32■□□□□ 0.68
Trbv29A0A0G2LB96 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trbv29A0A0G2LB96 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trbv29A0A0G2LB96 Gm30023-201ENSMUST00000197970 889 ntBASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms