Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trav12d-3A0A075B6A4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trav12d-3A0A075B6A4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav12d-3A0A075B6A4 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav12d-3A0A075B6A4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trav12d-3A0A075B6A4 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Trav12d-3A0A075B6A4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trav12d-3A0A075B6A4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav12d-3A0A075B6A4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav12d-3A0A075B6A4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav12d-3A0A075B6A4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav12d-3A0A075B6A4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav12d-3A0A075B6A4 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav12d-3A0A075B6A4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav12d-3A0A075B6A4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.68■□□□□ 0.42
Trav12d-3A0A075B6A4 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trav12d-3A0A075B6A4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav12d-3A0A075B6A4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav12d-3A0A075B6A4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trav12d-3A0A075B6A4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Trav12d-3A0A075B6A4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav12d-3A0A075B6A4 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.66■□□□□ 0.42
Trav12d-3A0A075B6A4 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav12d-3A0A075B6A4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trav12d-3A0A075B6A4 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav12d-3A0A075B6A4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav12d-3A0A075B6A4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.42
Trav12d-3A0A075B6A4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav12d-3A0A075B6A4 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trav12d-3A0A075B6A4 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav12d-3A0A075B6A4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav12d-3A0A075B6A4 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Trav12d-3A0A075B6A4 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav12d-3A0A075B6A4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC17.63■□□□□ 0.41
Trav12d-3A0A075B6A4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav12d-3A0A075B6A4 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav12d-3A0A075B6A4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav12d-3A0A075B6A4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav12d-3A0A075B6A4 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Trav12d-3A0A075B6A4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trav12d-3A0A075B6A4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC17.62■□□□□ 0.41
Trav12d-3A0A075B6A4 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Trav12d-3A0A075B6A4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav12d-3A0A075B6A4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav12d-3A0A075B6A4 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav12d-3A0A075B6A4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav12d-3A0A075B6A4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav12d-3A0A075B6A4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav12d-3A0A075B6A4 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Trav12d-3A0A075B6A4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC17.6■□□□□ 0.41
Trav12d-3A0A075B6A4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav12d-3A0A075B6A4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Trav12d-3A0A075B6A4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav12d-3A0A075B6A4 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav12d-3A0A075B6A4 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav12d-3A0A075B6A4 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav12d-3A0A075B6A4 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav12d-3A0A075B6A4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav12d-3A0A075B6A4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav12d-3A0A075B6A4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trav12d-3A0A075B6A4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.58■□□□□ 0.41
Trav12d-3A0A075B6A4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav12d-3A0A075B6A4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav12d-3A0A075B6A4 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav12d-3A0A075B6A4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav12d-3A0A075B6A4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav12d-3A0A075B6A4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav12d-3A0A075B6A4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav12d-3A0A075B6A4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav12d-3A0A075B6A4 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav12d-3A0A075B6A4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav12d-3A0A075B6A4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav12d-3A0A075B6A4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav12d-3A0A075B6A4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav12d-3A0A075B6A4 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav12d-3A0A075B6A4 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trav12d-3A0A075B6A4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav12d-3A0A075B6A4 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav12d-3A0A075B6A4 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav12d-3A0A075B6A4 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav12d-3A0A075B6A4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC17.54■□□□□ 0.4
Trav12d-3A0A075B6A4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav12d-3A0A075B6A4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav12d-3A0A075B6A4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav12d-3A0A075B6A4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav12d-3A0A075B6A4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav12d-3A0A075B6A4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav12d-3A0A075B6A4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav12d-3A0A075B6A4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trav12d-3A0A075B6A4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav12d-3A0A075B6A4 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC17.51■□□□□ 0.39
Trav12d-3A0A075B6A4 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.51■□□□□ 0.39
Trav12d-3A0A075B6A4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav12d-3A0A075B6A4 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav12d-3A0A075B6A4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav12d-3A0A075B6A4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.5■□□□□ 0.39
Trav12d-3A0A075B6A4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav12d-3A0A075B6A4 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav12d-3A0A075B6A4 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav12d-3A0A075B6A4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms