Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trav3-4A0A075B654 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav3-4A0A075B654 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav3-4A0A075B654 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav3-4A0A075B654 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC15.76■□□□□ 0.11
Trav3-4A0A075B654 Gm25238-201ENSMUST00000174914 89 ntBASIC15.76■□□□□ 0.11
Trav3-4A0A075B654 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
Trav3-4A0A075B654 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav3-4A0A075B654 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav3-4A0A075B654 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav3-4A0A075B654 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav3-4A0A075B654 Rab21-202ENSMUST00000218831 843 ntBASIC15.74■□□□□ 0.11
Trav3-4A0A075B654 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trav3-4A0A075B654 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav3-4A0A075B654 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav3-4A0A075B654 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Trav3-4A0A075B654 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav3-4A0A075B654 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav3-4A0A075B654 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Trav3-4A0A075B654 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav3-4A0A075B654 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav3-4A0A075B654 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Trav3-4A0A075B654 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav3-4A0A075B654 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav3-4A0A075B654 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav3-4A0A075B654 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav3-4A0A075B654 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Trav3-4A0A075B654 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav3-4A0A075B654 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trav3-4A0A075B654 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav3-4A0A075B654 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav3-4A0A075B654 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trav3-4A0A075B654 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav3-4A0A075B654 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav3-4A0A075B654 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav3-4A0A075B654 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trav3-4A0A075B654 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav3-4A0A075B654 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC15.69■□□□□ 0.1
Trav3-4A0A075B654 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav3-4A0A075B654 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav3-4A0A075B654 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav3-4A0A075B654 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav3-4A0A075B654 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Trav3-4A0A075B654 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav3-4A0A075B654 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Trav3-4A0A075B654 Gm30346-201ENSMUST00000218641 1699 ntBASIC15.67■□□□□ 0.1
Trav3-4A0A075B654 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav3-4A0A075B654 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav3-4A0A075B654 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Trav3-4A0A075B654 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
Trav3-4A0A075B654 Gm6277-202ENSMUST00000224036 2779 ntBASIC15.67■□□□□ 0.1
Trav3-4A0A075B654 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trav3-4A0A075B654 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav3-4A0A075B654 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav3-4A0A075B654 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trav3-4A0A075B654 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav3-4A0A075B654 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav3-4A0A075B654 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trav3-4A0A075B654 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav3-4A0A075B654 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav3-4A0A075B654 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav3-4A0A075B654 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav3-4A0A075B654 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav3-4A0A075B654 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
Trav3-4A0A075B654 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav3-4A0A075B654 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC15.64■□□□□ 0.09
Trav3-4A0A075B654 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav3-4A0A075B654 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav3-4A0A075B654 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav3-4A0A075B654 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav3-4A0A075B654 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav3-4A0A075B654 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav3-4A0A075B654 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav3-4A0A075B654 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Trav3-4A0A075B654 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav3-4A0A075B654 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav3-4A0A075B654 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav3-4A0A075B654 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav3-4A0A075B654 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav3-4A0A075B654 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav3-4A0A075B654 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Trav3-4A0A075B654 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav3-4A0A075B654 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trav3-4A0A075B654 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav3-4A0A075B654 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trav3-4A0A075B654 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trav3-4A0A075B654 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trav3-4A0A075B654 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trav3-4A0A075B654 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav3-4A0A075B654 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav3-4A0A075B654 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav3-4A0A075B654 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav3-4A0A075B654 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav3-4A0A075B654 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav3-4A0A075B654 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC15.6■□□□□ 0.09
Trav3-4A0A075B654 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav3-4A0A075B654 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav3-4A0A075B654 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav3-4A0A075B654 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav3-4A0A075B654 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms