Protein–RNA interactions for Protein: A0A075B626

Trav12n-2, T cell receptor alpha variable 12D-2, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12n-2A0A075B626 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Trav12n-2A0A075B626 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trav12n-2A0A075B626 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trav12n-2A0A075B626 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trav12n-2A0A075B626 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Trav12n-2A0A075B626 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trav12n-2A0A075B626 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trav12n-2A0A075B626 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trav12n-2A0A075B626 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Trav12n-2A0A075B626 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trav12n-2A0A075B626 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Trav12n-2A0A075B626 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trav12n-2A0A075B626 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trav12n-2A0A075B626 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trav12n-2A0A075B626 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trav12n-2A0A075B626 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Trav12n-2A0A075B626 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trav12n-2A0A075B626 Particl-201ENSMUST00000205370 1560 ntBASIC21.23■□□□□ 0.99
Trav12n-2A0A075B626 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trav12n-2A0A075B626 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trav12n-2A0A075B626 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Trav12n-2A0A075B626 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.23■□□□□ 0.99
Trav12n-2A0A075B626 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Trav12n-2A0A075B626 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trav12n-2A0A075B626 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trav12n-2A0A075B626 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trav12n-2A0A075B626 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trav12n-2A0A075B626 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.21■□□□□ 0.99
Trav12n-2A0A075B626 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.2■□□□□ 0.98
Trav12n-2A0A075B626 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trav12n-2A0A075B626 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
Trav12n-2A0A075B626 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Trav12n-2A0A075B626 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Trav12n-2A0A075B626 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trav12n-2A0A075B626 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.18■□□□□ 0.98
Trav12n-2A0A075B626 Gm7432-201ENSMUST00000210343 879 ntBASIC21.18■□□□□ 0.98
Trav12n-2A0A075B626 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trav12n-2A0A075B626 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trav12n-2A0A075B626 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trav12n-2A0A075B626 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trav12n-2A0A075B626 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trav12n-2A0A075B626 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trav12n-2A0A075B626 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.16■□□□□ 0.98
Trav12n-2A0A075B626 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trav12n-2A0A075B626 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trav12n-2A0A075B626 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.16■□□□□ 0.98
Trav12n-2A0A075B626 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Trav12n-2A0A075B626 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trav12n-2A0A075B626 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.14■□□□□ 0.97
Trav12n-2A0A075B626 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Trav12n-2A0A075B626 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trav12n-2A0A075B626 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Trav12n-2A0A075B626 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trav12n-2A0A075B626 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trav12n-2A0A075B626 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trav12n-2A0A075B626 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.13■□□□□ 0.97
Trav12n-2A0A075B626 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.13■□□□□ 0.97
Trav12n-2A0A075B626 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Trav12n-2A0A075B626 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trav12n-2A0A075B626 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trav12n-2A0A075B626 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trav12n-2A0A075B626 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trav12n-2A0A075B626 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trav12n-2A0A075B626 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.1■□□□□ 0.97
Trav12n-2A0A075B626 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trav12n-2A0A075B626 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trav12n-2A0A075B626 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trav12n-2A0A075B626 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trav12n-2A0A075B626 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trav12n-2A0A075B626 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trav12n-2A0A075B626 Gm11599-201ENSMUST00000118720 878 ntBASIC21.08■□□□□ 0.97
Trav12n-2A0A075B626 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trav12n-2A0A075B626 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trav12n-2A0A075B626 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trav12n-2A0A075B626 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
Trav12n-2A0A075B626 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Trav12n-2A0A075B626 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trav12n-2A0A075B626 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trav12n-2A0A075B626 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trav12n-2A0A075B626 Gm37136-201ENSMUST00000194368 194 ntBASIC21.06■□□□□ 0.96
Trav12n-2A0A075B626 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trav12n-2A0A075B626 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trav12n-2A0A075B626 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Trav12n-2A0A075B626 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trav12n-2A0A075B626 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trav12n-2A0A075B626 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trav12n-2A0A075B626 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.04■□□□□ 0.96
Trav12n-2A0A075B626 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.04■□□□□ 0.96
Trav12n-2A0A075B626 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trav12n-2A0A075B626 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trav12n-2A0A075B626 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21■□□□□ 0.95
Trav12n-2A0A075B626 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trav12n-2A0A075B626 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trav12n-2A0A075B626 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trav12n-2A0A075B626 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trav12n-2A0A075B626 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.99■□□□□ 0.95
Trav12n-2A0A075B626 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trav12n-2A0A075B626 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Trav12n-2A0A075B626 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trav12n-2A0A075B626 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 9.3 ms