Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.56□□□□□ -0.24
Smco4Q9JIS3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC13.56□□□□□ -0.24
Smco4Q9JIS3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smco4Q9JIS3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Smco4Q9JIS3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smco4Q9JIS3 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smco4Q9JIS3 Gm5921-201ENSMUST00000075898 882 ntBASIC13.56□□□□□ -0.24
Smco4Q9JIS3 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smco4Q9JIS3 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smco4Q9JIS3 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Smco4Q9JIS3 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smco4Q9JIS3 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smco4Q9JIS3 Gm10209-201ENSMUST00000203397 1607 ntBASIC13.56□□□□□ -0.24
Smco4Q9JIS3 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smco4Q9JIS3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.56□□□□□ -0.24
Smco4Q9JIS3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smco4Q9JIS3 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Smco4Q9JIS3 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smco4Q9JIS3 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Smco4Q9JIS3 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.56□□□□□ -0.24
Smco4Q9JIS3 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Smco4Q9JIS3 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smco4Q9JIS3 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Smco4Q9JIS3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smco4Q9JIS3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smco4Q9JIS3 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smco4Q9JIS3 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smco4Q9JIS3 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Smco4Q9JIS3 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smco4Q9JIS3 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smco4Q9JIS3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smco4Q9JIS3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smco4Q9JIS3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC13.55□□□□□ -0.24
Smco4Q9JIS3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC13.55□□□□□ -0.24
Smco4Q9JIS3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC13.55□□□□□ -0.24
Smco4Q9JIS3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC13.55□□□□□ -0.24
Smco4Q9JIS3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
Smco4Q9JIS3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smco4Q9JIS3 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.55□□□□□ -0.24
Smco4Q9JIS3 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smco4Q9JIS3 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smco4Q9JIS3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smco4Q9JIS3 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smco4Q9JIS3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smco4Q9JIS3 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smco4Q9JIS3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smco4Q9JIS3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Smco4Q9JIS3 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smco4Q9JIS3 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Smco4Q9JIS3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Smco4Q9JIS3 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.55□□□□□ -0.24
Smco4Q9JIS3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.54□□□□□ -0.24
Smco4Q9JIS3 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smco4Q9JIS3 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Smco4Q9JIS3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smco4Q9JIS3 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smco4Q9JIS3 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smco4Q9JIS3 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smco4Q9JIS3 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smco4Q9JIS3 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smco4Q9JIS3 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smco4Q9JIS3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.54□□□□□ -0.24
Smco4Q9JIS3 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smco4Q9JIS3 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smco4Q9JIS3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smco4Q9JIS3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smco4Q9JIS3 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smco4Q9JIS3 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smco4Q9JIS3 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smco4Q9JIS3 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smco4Q9JIS3 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Smco4Q9JIS3 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smco4Q9JIS3 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smco4Q9JIS3 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smco4Q9JIS3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smco4Q9JIS3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smco4Q9JIS3 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smco4Q9JIS3 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smco4Q9JIS3 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smco4Q9JIS3 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smco4Q9JIS3 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.53□□□□□ -0.24
Smco4Q9JIS3 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smco4Q9JIS3 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smco4Q9JIS3 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smco4Q9JIS3 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smco4Q9JIS3 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Smco4Q9JIS3 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smco4Q9JIS3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smco4Q9JIS3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC13.53□□□□□ -0.24
Smco4Q9JIS3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Smco4Q9JIS3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smco4Q9JIS3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC13.53□□□□□ -0.24
Smco4Q9JIS3 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smco4Q9JIS3 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Smco4Q9JIS3 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smco4Q9JIS3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smco4Q9JIS3 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smco4Q9JIS3 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smco4Q9JIS3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smco4Q9JIS3 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms