Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Uspl1Q3ULM6 Haglr-201ENSMUST00000100000 2085 ntBASIC21.64■■□□□ 1.05
Uspl1Q3ULM6 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Uspl1Q3ULM6 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Uspl1Q3ULM6 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC21.64■■□□□ 1.05
Uspl1Q3ULM6 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Uspl1Q3ULM6 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Uspl1Q3ULM6 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Uspl1Q3ULM6 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Uspl1Q3ULM6 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Uspl1Q3ULM6 Zkscan4-202ENSMUST00000225845 1506 ntBASIC21.64■■□□□ 1.05
Uspl1Q3ULM6 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Uspl1Q3ULM6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Uspl1Q3ULM6 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Uspl1Q3ULM6 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
Uspl1Q3ULM6 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Uspl1Q3ULM6 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Uspl1Q3ULM6 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Uspl1Q3ULM6 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Uspl1Q3ULM6 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Uspl1Q3ULM6 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
Uspl1Q3ULM6 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Uspl1Q3ULM6 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Uspl1Q3ULM6 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC21.63■■□□□ 1.05
Uspl1Q3ULM6 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC21.63■■□□□ 1.05
Uspl1Q3ULM6 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC21.63■■□□□ 1.05
Uspl1Q3ULM6 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Uspl1Q3ULM6 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Uspl1Q3ULM6 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC21.63■■□□□ 1.05
Uspl1Q3ULM6 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Uspl1Q3ULM6 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC21.62■■□□□ 1.05
Uspl1Q3ULM6 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Uspl1Q3ULM6 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Uspl1Q3ULM6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Uspl1Q3ULM6 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Uspl1Q3ULM6 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Uspl1Q3ULM6 Mir770-201ENSMUST00000103252 94 ntBASIC21.62■■□□□ 1.05
Uspl1Q3ULM6 Gm6728-201ENSMUST00000178117 1065 ntBASIC21.62■■□□□ 1.05
Uspl1Q3ULM6 Gm7977-201ENSMUST00000193787 748 ntBASIC21.62■■□□□ 1.05
Uspl1Q3ULM6 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC21.62■■□□□ 1.05
Uspl1Q3ULM6 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Uspl1Q3ULM6 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC21.62■■□□□ 1.05
Uspl1Q3ULM6 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Uspl1Q3ULM6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC21.62■■□□□ 1.05
Uspl1Q3ULM6 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Uspl1Q3ULM6 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Uspl1Q3ULM6 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Uspl1Q3ULM6 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Uspl1Q3ULM6 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Uspl1Q3ULM6 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Uspl1Q3ULM6 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Uspl1Q3ULM6 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Uspl1Q3ULM6 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC21.61■■□□□ 1.05
Uspl1Q3ULM6 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC21.61■■□□□ 1.05
Uspl1Q3ULM6 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Uspl1Q3ULM6 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Uspl1Q3ULM6 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC21.61■■□□□ 1.05
Uspl1Q3ULM6 AC159205.3-201ENSMUST00000224614 874 ntBASIC21.61■■□□□ 1.05
Uspl1Q3ULM6 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Uspl1Q3ULM6 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Uspl1Q3ULM6 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Uspl1Q3ULM6 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Uspl1Q3ULM6 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Uspl1Q3ULM6 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Uspl1Q3ULM6 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
Uspl1Q3ULM6 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Uspl1Q3ULM6 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Uspl1Q3ULM6 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Uspl1Q3ULM6 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Uspl1Q3ULM6 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Uspl1Q3ULM6 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Uspl1Q3ULM6 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC21.6■■□□□ 1.05
Uspl1Q3ULM6 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Uspl1Q3ULM6 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC21.6■■□□□ 1.05
Uspl1Q3ULM6 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Uspl1Q3ULM6 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Uspl1Q3ULM6 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Uspl1Q3ULM6 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Uspl1Q3ULM6 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Uspl1Q3ULM6 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Uspl1Q3ULM6 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
Uspl1Q3ULM6 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC21.59■■□□□ 1.05
Uspl1Q3ULM6 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Uspl1Q3ULM6 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Uspl1Q3ULM6 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Uspl1Q3ULM6 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC21.59■■□□□ 1.05
Uspl1Q3ULM6 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Uspl1Q3ULM6 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Uspl1Q3ULM6 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Uspl1Q3ULM6 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Uspl1Q3ULM6 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Uspl1Q3ULM6 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Uspl1Q3ULM6 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Uspl1Q3ULM6 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Uspl1Q3ULM6 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Uspl1Q3ULM6 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC21.58■■□□□ 1.05
Uspl1Q3ULM6 AA414768-201ENSMUST00000121924 1257 ntBASIC21.58■■□□□ 1.05
Uspl1Q3ULM6 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Uspl1Q3ULM6 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Uspl1Q3ULM6 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 105.7 ms