Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mre11Q61216 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mre11Q61216 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Mre11Q61216 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Mre11Q61216 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mre11Q61216 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Mre11Q61216 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC20.22■□□□□ 0.83
Mre11Q61216 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Mre11Q61216 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Mre11Q61216 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mre11Q61216 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mre11Q61216 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mre11Q61216 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Mre11Q61216 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mre11Q61216 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mre11Q61216 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mre11Q61216 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mre11Q61216 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Mre11Q61216 Mir2861-201ENSMUST00000175539 82 ntBASIC20.21■□□□□ 0.83
Mre11Q61216 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Mre11Q61216 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.21■□□□□ 0.83
Mre11Q61216 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Mre11Q61216 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mre11Q61216 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mre11Q61216 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mre11Q61216 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mre11Q61216 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Mre11Q61216 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Mre11Q61216 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mre11Q61216 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mre11Q61216 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.2■□□□□ 0.82
Mre11Q61216 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mre11Q61216 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mre11Q61216 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mre11Q61216 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mre11Q61216 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Mre11Q61216 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mre11Q61216 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Mre11Q61216 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mre11Q61216 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC20.19■□□□□ 0.82
Mre11Q61216 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mre11Q61216 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mre11Q61216 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Mre11Q61216 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mre11Q61216 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Mre11Q61216 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mre11Q61216 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Mre11Q61216 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mre11Q61216 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mre11Q61216 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Mre11Q61216 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mre11Q61216 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mre11Q61216 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mre11Q61216 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mre11Q61216 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mre11Q61216 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mre11Q61216 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mre11Q61216 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mre11Q61216 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mre11Q61216 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mre11Q61216 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mre11Q61216 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mre11Q61216 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Mre11Q61216 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.18■□□□□ 0.82
Mre11Q61216 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.18■□□□□ 0.82
Mre11Q61216 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.18■□□□□ 0.82
Mre11Q61216 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mre11Q61216 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Mre11Q61216 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mre11Q61216 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Mre11Q61216 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mre11Q61216 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Mre11Q61216 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mre11Q61216 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Mre11Q61216 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mre11Q61216 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Mre11Q61216 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.18■□□□□ 0.82
Mre11Q61216 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mre11Q61216 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mre11Q61216 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Mre11Q61216 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mre11Q61216 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mre11Q61216 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mre11Q61216 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Mre11Q61216 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.17■□□□□ 0.82
Mre11Q61216 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Mre11Q61216 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mre11Q61216 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mre11Q61216 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mre11Q61216 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mre11Q61216 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Mre11Q61216 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Mre11Q61216 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mre11Q61216 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mre11Q61216 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mre11Q61216 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Mre11Q61216 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mre11Q61216 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mre11Q61216 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mre11Q61216 Gm43598-201ENSMUST00000202482 2479 ntBASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms