Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco4Q9JIS3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco4Q9JIS3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smco4Q9JIS3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC13.64□□□□□ -0.23
Smco4Q9JIS3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco4Q9JIS3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC13.64□□□□□ -0.23
Smco4Q9JIS3 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco4Q9JIS3 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.64□□□□□ -0.23
Smco4Q9JIS3 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smco4Q9JIS3 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco4Q9JIS3 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco4Q9JIS3 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco4Q9JIS3 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco4Q9JIS3 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smco4Q9JIS3 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco4Q9JIS3 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Smco4Q9JIS3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smco4Q9JIS3 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco4Q9JIS3 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco4Q9JIS3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco4Q9JIS3 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco4Q9JIS3 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco4Q9JIS3 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco4Q9JIS3 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
Smco4Q9JIS3 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco4Q9JIS3 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco4Q9JIS3 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smco4Q9JIS3 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.63□□□□□ -0.23
Smco4Q9JIS3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smco4Q9JIS3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco4Q9JIS3 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco4Q9JIS3 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco4Q9JIS3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco4Q9JIS3 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.63□□□□□ -0.23
Smco4Q9JIS3 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco4Q9JIS3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco4Q9JIS3 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco4Q9JIS3 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Smco4Q9JIS3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco4Q9JIS3 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Smco4Q9JIS3 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco4Q9JIS3 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smco4Q9JIS3 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Smco4Q9JIS3 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.62□□□□□ -0.23
Smco4Q9JIS3 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smco4Q9JIS3 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smco4Q9JIS3 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smco4Q9JIS3 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smco4Q9JIS3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smco4Q9JIS3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Smco4Q9JIS3 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smco4Q9JIS3 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Smco4Q9JIS3 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smco4Q9JIS3 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smco4Q9JIS3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smco4Q9JIS3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC13.62□□□□□ -0.23
Smco4Q9JIS3 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Smco4Q9JIS3 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.62□□□□□ -0.23
Smco4Q9JIS3 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smco4Q9JIS3 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smco4Q9JIS3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Smco4Q9JIS3 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smco4Q9JIS3 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smco4Q9JIS3 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smco4Q9JIS3 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smco4Q9JIS3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.61□□□□□ -0.23
Smco4Q9JIS3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smco4Q9JIS3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smco4Q9JIS3 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.61□□□□□ -0.23
Smco4Q9JIS3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smco4Q9JIS3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smco4Q9JIS3 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smco4Q9JIS3 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smco4Q9JIS3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smco4Q9JIS3 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smco4Q9JIS3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smco4Q9JIS3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smco4Q9JIS3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC13.61□□□□□ -0.23
Smco4Q9JIS3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC13.61□□□□□ -0.23
Smco4Q9JIS3 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC13.61□□□□□ -0.23
Smco4Q9JIS3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Smco4Q9JIS3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smco4Q9JIS3 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smco4Q9JIS3 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smco4Q9JIS3 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smco4Q9JIS3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smco4Q9JIS3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smco4Q9JIS3 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smco4Q9JIS3 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smco4Q9JIS3 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Smco4Q9JIS3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smco4Q9JIS3 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smco4Q9JIS3 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smco4Q9JIS3 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Smco4Q9JIS3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smco4Q9JIS3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Smco4Q9JIS3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smco4Q9JIS3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smco4Q9JIS3 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smco4Q9JIS3 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 136.8 ms