Protein–RNA interactions for Protein: Q8BVF4

Ccdc30, Coiled-coil domain-containing protein 30, mousemouse

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc30Q8BVF4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
Ccdc30Q8BVF4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
Ccdc30Q8BVF4 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc30Q8BVF4 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc30Q8BVF4 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc30Q8BVF4 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc30Q8BVF4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Ccdc30Q8BVF4 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC21.76■■□□□ 1.07
Ccdc30Q8BVF4 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC21.76■■□□□ 1.07
Ccdc30Q8BVF4 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC21.76■■□□□ 1.07
Ccdc30Q8BVF4 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc30Q8BVF4 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc30Q8BVF4 Gm3272-201ENSMUST00000181181 1229 ntBASIC21.76■■□□□ 1.07
Ccdc30Q8BVF4 AC153881.2-201ENSMUST00000214877 204 ntBASIC21.76■■□□□ 1.07
Ccdc30Q8BVF4 Gm10566-201ENSMUST00000086739 996 ntBASIC21.76■■□□□ 1.07
Ccdc30Q8BVF4 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Ccdc30Q8BVF4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc30Q8BVF4 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc30Q8BVF4 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc30Q8BVF4 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc30Q8BVF4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc30Q8BVF4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc30Q8BVF4 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc30Q8BVF4 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc30Q8BVF4 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc30Q8BVF4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc30Q8BVF4 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc30Q8BVF4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc30Q8BVF4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc30Q8BVF4 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc30Q8BVF4 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc30Q8BVF4 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc30Q8BVF4 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc30Q8BVF4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc30Q8BVF4 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc30Q8BVF4 Gm13186-201ENSMUST00000118031 316 ntBASIC21.74■■□□□ 1.07
Ccdc30Q8BVF4 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc30Q8BVF4 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc30Q8BVF4 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc30Q8BVF4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Ccdc30Q8BVF4 Actl10-202ENSMUST00000226583 1501 ntBASIC21.74■■□□□ 1.07
Ccdc30Q8BVF4 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc30Q8BVF4 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Ccdc30Q8BVF4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Ccdc30Q8BVF4 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc30Q8BVF4 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Ccdc30Q8BVF4 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc30Q8BVF4 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc30Q8BVF4 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc30Q8BVF4 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Ccdc30Q8BVF4 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Ccdc30Q8BVF4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.73■■□□□ 1.07
Ccdc30Q8BVF4 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc30Q8BVF4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Ccdc30Q8BVF4 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc30Q8BVF4 Haglr-201ENSMUST00000100000 2085 ntBASIC21.73■■□□□ 1.07
Ccdc30Q8BVF4 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc30Q8BVF4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc30Q8BVF4 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc30Q8BVF4 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc30Q8BVF4 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Ccdc30Q8BVF4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc30Q8BVF4 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc30Q8BVF4 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc30Q8BVF4 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc30Q8BVF4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc30Q8BVF4 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc30Q8BVF4 Gm7213-201ENSMUST00000215977 950 ntBASIC21.72■■□□□ 1.07
Ccdc30Q8BVF4 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc30Q8BVF4 Phf7-203ENSMUST00000226565 1971 ntBASIC21.72■■□□□ 1.07
Ccdc30Q8BVF4 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc30Q8BVF4 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc30Q8BVF4 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Ccdc30Q8BVF4 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc30Q8BVF4 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc30Q8BVF4 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Ccdc30Q8BVF4 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc30Q8BVF4 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc30Q8BVF4 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc30Q8BVF4 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Ccdc30Q8BVF4 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Ccdc30Q8BVF4 Gm13474-201ENSMUST00000122466 815 ntBASIC21.71■■□□□ 1.07
Ccdc30Q8BVF4 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Ccdc30Q8BVF4 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc30Q8BVF4 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc30Q8BVF4 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc30Q8BVF4 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc30Q8BVF4 Gm6190-201ENSMUST00000220683 1374 ntBASIC21.71■■□□□ 1.07
Ccdc30Q8BVF4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Ccdc30Q8BVF4 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc30Q8BVF4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC21.71■■□□□ 1.07
Ccdc30Q8BVF4 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc30Q8BVF4 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc30Q8BVF4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC21.7■■□□□ 1.06
Ccdc30Q8BVF4 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc30Q8BVF4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc30Q8BVF4 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
Ccdc30Q8BVF4 Gm6433-201ENSMUST00000118634 875 ntBASIC21.7■■□□□ 1.06
Ccdc30Q8BVF4 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
Ccdc30Q8BVF4 Gm45058-201ENSMUST00000205810 766 ntBASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 96.1 ms