Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxd1Q61345 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxd1Q61345 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxd1Q61345 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxd1Q61345 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.44■□□□□ 0.7
Foxd1Q61345 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Foxd1Q61345 Gm11025-201ENSMUST00000140773 466 ntBASIC19.44■□□□□ 0.7
Foxd1Q61345 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC19.44■□□□□ 0.7
Foxd1Q61345 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.44■□□□□ 0.7
Foxd1Q61345 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.44■□□□□ 0.7
Foxd1Q61345 Ndufaf2-202ENSMUST00000223734 556 ntBASIC19.44■□□□□ 0.7
Foxd1Q61345 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxd1Q61345 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxd1Q61345 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Foxd1Q61345 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxd1Q61345 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxd1Q61345 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxd1Q61345 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxd1Q61345 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Foxd1Q61345 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Foxd1Q61345 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Foxd1Q61345 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Foxd1Q61345 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Foxd1Q61345 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.43■□□□□ 0.7
Foxd1Q61345 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Foxd1Q61345 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.43■□□□□ 0.7
Foxd1Q61345 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Foxd1Q61345 AC151286.1-201ENSMUST00000198489 145 ntBASIC19.43■□□□□ 0.7
Foxd1Q61345 Psmb5-202ENSMUST00000227257 622 ntBASIC19.43■□□□□ 0.7
Foxd1Q61345 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Foxd1Q61345 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Foxd1Q61345 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Foxd1Q61345 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Foxd1Q61345 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Foxd1Q61345 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Foxd1Q61345 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Foxd1Q61345 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Foxd1Q61345 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Foxd1Q61345 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Foxd1Q61345 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Foxd1Q61345 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Foxd1Q61345 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Foxd1Q61345 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Foxd1Q61345 Gm12260-201ENSMUST00000122447 411 ntBASIC19.42■□□□□ 0.7
Foxd1Q61345 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Foxd1Q61345 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Foxd1Q61345 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC19.42■□□□□ 0.7
Foxd1Q61345 Gm10060-201ENSMUST00000212002 111 ntBASIC19.42■□□□□ 0.7
Foxd1Q61345 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Foxd1Q61345 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.42■□□□□ 0.7
Foxd1Q61345 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Foxd1Q61345 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Foxd1Q61345 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Foxd1Q61345 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Foxd1Q61345 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Foxd1Q61345 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Foxd1Q61345 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Foxd1Q61345 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.41■□□□□ 0.7
Foxd1Q61345 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Foxd1Q61345 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
Foxd1Q61345 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Foxd1Q61345 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Foxd1Q61345 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.41■□□□□ 0.7
Foxd1Q61345 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.41■□□□□ 0.7
Foxd1Q61345 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC19.41■□□□□ 0.7
Foxd1Q61345 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC19.41■□□□□ 0.7
Foxd1Q61345 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Foxd1Q61345 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Foxd1Q61345 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Foxd1Q61345 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Foxd1Q61345 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Foxd1Q61345 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Foxd1Q61345 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Foxd1Q61345 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Foxd1Q61345 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Foxd1Q61345 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Foxd1Q61345 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.41■□□□□ 0.7
Foxd1Q61345 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Foxd1Q61345 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.4■□□□□ 0.7
Foxd1Q61345 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Foxd1Q61345 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Foxd1Q61345 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Foxd1Q61345 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Foxd1Q61345 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Foxd1Q61345 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Foxd1Q61345 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Foxd1Q61345 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Foxd1Q61345 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Foxd1Q61345 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Foxd1Q61345 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.4■□□□□ 0.7
Foxd1Q61345 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Foxd1Q61345 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.4■□□□□ 0.7
Foxd1Q61345 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Foxd1Q61345 Gm15222-202ENSMUST00000228667 1726 ntBASIC19.39■□□□□ 0.7
Foxd1Q61345 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Foxd1Q61345 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Foxd1Q61345 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Foxd1Q61345 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Foxd1Q61345 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Foxd1Q61345 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms