Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trim43aQ3TL54 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43aQ3TL54 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43aQ3TL54 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43aQ3TL54 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43aQ3TL54 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43aQ3TL54 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trim43aQ3TL54 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43aQ3TL54 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43aQ3TL54 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.9■□□□□ 0.46
Trim43aQ3TL54 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.9■□□□□ 0.46
Trim43aQ3TL54 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.9■□□□□ 0.46
Trim43aQ3TL54 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.9■□□□□ 0.46
Trim43aQ3TL54 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43aQ3TL54 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43aQ3TL54 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trim43aQ3TL54 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43aQ3TL54 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43aQ3TL54 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.9■□□□□ 0.46
Trim43aQ3TL54 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43aQ3TL54 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43aQ3TL54 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43aQ3TL54 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43aQ3TL54 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43aQ3TL54 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.89■□□□□ 0.46
Trim43aQ3TL54 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Trim43aQ3TL54 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim43aQ3TL54 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim43aQ3TL54 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim43aQ3TL54 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.89■□□□□ 0.45
Trim43aQ3TL54 Gm22240-201ENSMUST00000175225 82 ntBASIC17.89■□□□□ 0.45
Trim43aQ3TL54 Gm2559-201ENSMUST00000201323 363 ntBASIC17.89■□□□□ 0.45
Trim43aQ3TL54 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim43aQ3TL54 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.89■□□□□ 0.45
Trim43aQ3TL54 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim43aQ3TL54 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.89■□□□□ 0.45
Trim43aQ3TL54 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim43aQ3TL54 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim43aQ3TL54 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trim43aQ3TL54 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim43aQ3TL54 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
Trim43aQ3TL54 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim43aQ3TL54 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim43aQ3TL54 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim43aQ3TL54 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.88■□□□□ 0.45
Trim43aQ3TL54 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim43aQ3TL54 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim43aQ3TL54 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.88■□□□□ 0.45
Trim43aQ3TL54 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim43aQ3TL54 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim43aQ3TL54 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim43aQ3TL54 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim43aQ3TL54 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim43aQ3TL54 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim43aQ3TL54 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim43aQ3TL54 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trim43aQ3TL54 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trim43aQ3TL54 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.87■□□□□ 0.45
Trim43aQ3TL54 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Trim43aQ3TL54 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43aQ3TL54 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43aQ3TL54 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43aQ3TL54 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.87■□□□□ 0.45
Trim43aQ3TL54 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43aQ3TL54 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.87■□□□□ 0.45
Trim43aQ3TL54 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43aQ3TL54 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43aQ3TL54 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43aQ3TL54 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trim43aQ3TL54 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43aQ3TL54 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43aQ3TL54 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trim43aQ3TL54 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43aQ3TL54 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.87■□□□□ 0.45
Trim43aQ3TL54 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43aQ3TL54 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43aQ3TL54 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43aQ3TL54 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43aQ3TL54 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim43aQ3TL54 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim43aQ3TL54 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim43aQ3TL54 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.86■□□□□ 0.45
Trim43aQ3TL54 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trim43aQ3TL54 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim43aQ3TL54 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim43aQ3TL54 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trim43aQ3TL54 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim43aQ3TL54 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim43aQ3TL54 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim43aQ3TL54 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.86■□□□□ 0.45
Trim43aQ3TL54 Gm37856-201ENSMUST00000191634 999 ntBASIC17.86■□□□□ 0.45
Trim43aQ3TL54 Trmt13-210ENSMUST00000198454 880 ntBASIC17.86■□□□□ 0.45
Trim43aQ3TL54 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Trim43aQ3TL54 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim43aQ3TL54 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim43aQ3TL54 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim43aQ3TL54 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim43aQ3TL54 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Trim43aQ3TL54 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim43aQ3TL54 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms