Protein–RNA interactions for Protein: A2ACT7

Col9a3, Collagen, type IX, alpha 3, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a3A2ACT7 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col9a3A2ACT7 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col9a3A2ACT7 Gm13312-201ENSMUST00000119631 718 ntBASIC16.42■□□□□ 0.22
Col9a3A2ACT7 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col9a3A2ACT7 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.42■□□□□ 0.22
Col9a3A2ACT7 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.42■□□□□ 0.22
Col9a3A2ACT7 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.42■□□□□ 0.22
Col9a3A2ACT7 Gm6376-201ENSMUST00000209407 580 ntBASIC16.42■□□□□ 0.22
Col9a3A2ACT7 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Col9a3A2ACT7 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col9a3A2ACT7 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
Col9a3A2ACT7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.42■□□□□ 0.22
Col9a3A2ACT7 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col9a3A2ACT7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Col9a3A2ACT7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col9a3A2ACT7 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col9a3A2ACT7 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Col9a3A2ACT7 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.42■□□□□ 0.22
Col9a3A2ACT7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Col9a3A2ACT7 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col9a3A2ACT7 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col9a3A2ACT7 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col9a3A2ACT7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col9a3A2ACT7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col9a3A2ACT7 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.41■□□□□ 0.22
Col9a3A2ACT7 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.41■□□□□ 0.22
Col9a3A2ACT7 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Col9a3A2ACT7 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.41■□□□□ 0.22
Col9a3A2ACT7 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col9a3A2ACT7 Rps4l-201ENSMUST00000071745 943 ntBASIC16.41■□□□□ 0.22
Col9a3A2ACT7 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col9a3A2ACT7 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col9a3A2ACT7 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col9a3A2ACT7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.41■□□□□ 0.22
Col9a3A2ACT7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Gm7862-201ENSMUST00000121461 292 ntBASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Gm44357-201ENSMUST00000195897 142 ntBASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Gm19658-201ENSMUST00000196231 138 ntBASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Gm44367-201ENSMUST00000196836 138 ntBASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Gm44350-201ENSMUST00000197197 138 ntBASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Gm44390-201ENSMUST00000197533 144 ntBASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Gm44313-201ENSMUST00000198018 138 ntBASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Gm44486-201ENSMUST00000198508 138 ntBASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Gm44454-201ENSMUST00000198541 138 ntBASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Gm44314-201ENSMUST00000199263 138 ntBASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Gm44394-201ENSMUST00000199558 138 ntBASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Gm44484-201ENSMUST00000199873 138 ntBASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Gm44466-201ENSMUST00000200264 138 ntBASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Gm44359-201ENSMUST00000200671 138 ntBASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.4■□□□□ 0.22
Col9a3A2ACT7 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col9a3A2ACT7 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Col9a3A2ACT7 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Col9a3A2ACT7 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col9a3A2ACT7 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Col9a3A2ACT7 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col9a3A2ACT7 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col9a3A2ACT7 Rprl3-201ENSMUST00000157400 290 ntBASIC16.39■□□□□ 0.21
Col9a3A2ACT7 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.39■□□□□ 0.21
Col9a3A2ACT7 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Col9a3A2ACT7 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col9a3A2ACT7 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.39■□□□□ 0.21
Col9a3A2ACT7 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col9a3A2ACT7 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Col9a3A2ACT7 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Col9a3A2ACT7 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col9a3A2ACT7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col9a3A2ACT7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col9a3A2ACT7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col9a3A2ACT7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col9a3A2ACT7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.38■□□□□ 0.21
Col9a3A2ACT7 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.38■□□□□ 0.21
Col9a3A2ACT7 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.38■□□□□ 0.21
Col9a3A2ACT7 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col9a3A2ACT7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col9a3A2ACT7 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col9a3A2ACT7 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.38■□□□□ 0.21
Col9a3A2ACT7 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 127.1 ms