Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm23676-201ENSMUST00000157314 105 ntBASIC-2.71□□□□□ -2.84
Trim54Q9ERP3 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-2.73□□□□□ -2.85
Trim54Q9ERP3 Mir7681-201ENSMUST00000184834 72 ntBASIC-2.73□□□□□ -2.85
Trim54Q9ERP3 Gm26231-201ENSMUST00000175218 67 ntBASIC-2.74□□□□□ -2.85
Trim54Q9ERP3 Gm44303-201ENSMUST00000196348 83 ntBASIC-2.77□□□□□ -2.85
Trim54Q9ERP3 Gm27882-201ENSMUST00000184904 74 ntBASIC-2.78□□□□□ -2.85
Trim54Q9ERP3 Mir6395-201ENSMUST00000183885 91 ntBASIC-2.84□□□□□ -2.86
Trim54Q9ERP3 Gm25867-201ENSMUST00000158254 103 ntBASIC-2.86□□□□□ -2.87
Trim54Q9ERP3 Gm27995-201ENSMUST00000184402 100 ntBASIC-2.87□□□□□ -2.87
Trim54Q9ERP3 Mir124a-1-201ENSMUST00000083663 85 ntBASIC-2.88□□□□□ -2.87
Trim54Q9ERP3 Gm26307-201ENSMUST00000157767 126 ntBASIC-2.89□□□□□ -2.87
Trim54Q9ERP3 Gm26008-201ENSMUST00000158797 99 ntBASIC-2.92□□□□□ -2.88
Trim54Q9ERP3 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-2.97□□□□□ -2.88
Trim54Q9ERP3 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-2.97□□□□□ -2.88
Trim54Q9ERP3 Mir1912-201ENSMUST00000175298 87 ntBASIC-2.98□□□□□ -2.89
Trim54Q9ERP3 Gm24531-201ENSMUST00000157945 100 ntBASIC-3.01□□□□□ -2.89
Trim54Q9ERP3 Gm20473-201ENSMUST00000173064 112 ntBASIC-3.01□□□□□ -2.89
Trim54Q9ERP3 Mir2136-201ENSMUST00000158781 75 ntBASIC-3.02□□□□□ -2.89
Trim54Q9ERP3 Mir154-201ENSMUST00000083514 66 ntBASIC-3.03□□□□□ -2.89
Trim54Q9ERP3 Gm25521-201ENSMUST00000158393 108 ntBASIC-3.14□□□□□ -2.91
Trim54Q9ERP3 Gm27671-201ENSMUST00000183739 66 ntBASIC-3.22□□□□□ -2.92
Trim54Q9ERP3 AC160976.1-201ENSMUST00000215092 148 ntBASIC-3.28□□□□□ -2.93
Trim54Q9ERP3 Gm25049-201ENSMUST00000158597 73 ntBASIC-3.29□□□□□ -2.94
Trim54Q9ERP3 Gm25254-201ENSMUST00000157239 104 ntBASIC-3.31□□□□□ -2.94
Trim54Q9ERP3 Gm22593-201ENSMUST00000104245 109 ntBASIC-3.44□□□□□ -2.96
Trim54Q9ERP3 Gm23210-201ENSMUST00000158668 98 ntBASIC-3.66□□□□□ -3
Trim54Q9ERP3 n-R5s218-201ENSMUST00000122583 109 ntBASIC-3.73□□□□□ -3.01
Trim54Q9ERP3 Gm25886-201ENSMUST00000157780 114 ntBASIC-3.82□□□□□ -3.02
Trim54Q9ERP3 Gm25039-201ENSMUST00000082933 107 ntBASIC-4.05□□□□□ -3.06
Trim54Q9ERP3 Gm23248-201ENSMUST00000083367 108 ntBASIC-4.14□□□□□ -3.07
Trim54Q9ERP3 Gm23125-201ENSMUST00000157651 106 ntBASIC-4.23□□□□□ -3.09
Trim54Q9ERP3 n-R5s214-201ENSMUST00000122494 121 ntBASIC-4.39□□□□□ -3.11
Retrieved 32 of 76,532 protein–RNA pairs in 161 ms