Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm22127-201ENSMUST00000083239 106 ntBASIC-3.73□□□□□ -3.01
Smarca1Q6PGB8 Mir1912-201ENSMUST00000175298 87 ntBASIC-3.76□□□□□ -3.01
Smarca1Q6PGB8 Gm26227-201ENSMUST00000082510 101 ntBASIC-3.76□□□□□ -3.01
Smarca1Q6PGB8 Gm24387-201ENSMUST00000104625 90 ntBASIC-3.82□□□□□ -3.02
Smarca1Q6PGB8 Gm26008-201ENSMUST00000158797 99 ntBASIC-3.84□□□□□ -3.02
Smarca1Q6PGB8 Gm25950-201ENSMUST00000175331 100 ntBASIC-3.87□□□□□ -3.03
Smarca1Q6PGB8 Gm22301-201ENSMUST00000082656 107 ntBASIC-3.94□□□□□ -3.04
Smarca1Q6PGB8 n-R5s218-201ENSMUST00000122583 109 ntBASIC-3.97□□□□□ -3.04
Smarca1Q6PGB8 Gm22943-201ENSMUST00000158564 76 ntBASIC-3.97□□□□□ -3.04
Smarca1Q6PGB8 Gm26306-201ENSMUST00000157773 119 ntBASIC-3.98□□□□□ -3.05
Smarca1Q6PGB8 Gm22550-201ENSMUST00000179774 107 ntBASIC-4.01□□□□□ -3.05
Smarca1Q6PGB8 Gm22060-201ENSMUST00000082558 107 ntBASIC-4.01□□□□□ -3.05
Smarca1Q6PGB8 Mir7681-201ENSMUST00000184834 72 ntBASIC-4.02□□□□□ -3.05
Smarca1Q6PGB8 Gm26259-201ENSMUST00000104778 97 ntBASIC-4.17□□□□□ -3.08
Smarca1Q6PGB8 Gm27671-201ENSMUST00000183739 66 ntBASIC-4.21□□□□□ -3.08
Smarca1Q6PGB8 Gm44303-201ENSMUST00000196348 83 ntBASIC-4.23□□□□□ -3.09
Smarca1Q6PGB8 Gm24194-201ENSMUST00000116805 90 ntBASIC-4.27□□□□□ -3.09
Smarca1Q6PGB8 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-4.27□□□□□ -3.09
Smarca1Q6PGB8 Gm25132-201ENSMUST00000082652 107 ntBASIC-4.31□□□□□ -3.1
Smarca1Q6PGB8 Gm23210-201ENSMUST00000158668 98 ntBASIC-4.35□□□□□ -3.11
Smarca1Q6PGB8 Gm25521-201ENSMUST00000158393 108 ntBASIC-4.39□□□□□ -3.11
Smarca1Q6PGB8 Gm25254-201ENSMUST00000157239 104 ntBASIC-4.43□□□□□ -3.12
Smarca1Q6PGB8 Gm25049-201ENSMUST00000158597 73 ntBASIC-4.7□□□□□ -3.16
Smarca1Q6PGB8 Gm20473-201ENSMUST00000173064 112 ntBASIC-4.83□□□□□ -3.18
Smarca1Q6PGB8 Gm25039-201ENSMUST00000082933 107 ntBASIC-4.96□□□□□ -3.2
Smarca1Q6PGB8 n-R5s214-201ENSMUST00000122494 121 ntBASIC-5.01□□□□□ -3.21
Smarca1Q6PGB8 Gm24531-201ENSMUST00000157945 100 ntBASIC-5.29□□□□□ -3.26
Smarca1Q6PGB8 Gm23248-201ENSMUST00000083367 108 ntBASIC-5.38□□□□□ -3.27
Smarca1Q6PGB8 Gm22593-201ENSMUST00000104245 109 ntBASIC-5.64□□□□□ -3.31
Smarca1Q6PGB8 AC160976.1-201ENSMUST00000215092 148 ntBASIC-5.87□□□□□ -3.35
Smarca1Q6PGB8 Gm23125-201ENSMUST00000157651 106 ntBASIC-6.39□□□□□ -3.43
Smarca1Q6PGB8 Gm25886-201ENSMUST00000157780 114 ntBASIC-6.57□□□□□ -3.46
Retrieved 32 of 76,532 protein–RNA pairs in 231 ms