Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Gm22060-201ENSMUST00000082558 107 ntBASIC-5.66□□□□□ -3.32
Trav15-1-dv6-1Q5R1D2 Gm23826-201ENSMUST00000157394 119 ntBASIC-5.72□□□□□ -3.33
Trav15-1-dv6-1Q5R1D2 Gm27671-201ENSMUST00000183739 66 ntBASIC-5.75□□□□□ -3.33
Trav15-1-dv6-1Q5R1D2 Gm24194-201ENSMUST00000116805 90 ntBASIC-5.81□□□□□ -3.34
Trav15-1-dv6-1Q5R1D2 Gm25521-201ENSMUST00000158393 108 ntBASIC-5.81□□□□□ -3.34
Trav15-1-dv6-1Q5R1D2 Gm25354-201ENSMUST00000179110 105 ntBASIC-5.84□□□□□ -3.34
Trav15-1-dv6-1Q5R1D2 Gm44385-201ENSMUST00000198781 81 ntBASIC-5.9□□□□□ -3.35
Trav15-1-dv6-1Q5R1D2 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-5.91□□□□□ -3.36
Trav15-1-dv6-1Q5R1D2 Gm44303-201ENSMUST00000196348 83 ntBASIC-5.94□□□□□ -3.36
Trav15-1-dv6-1Q5R1D2 Gm25132-201ENSMUST00000082652 107 ntBASIC-5.94□□□□□ -3.36
Trav15-1-dv6-1Q5R1D2 Gm22067-201ENSMUST00000122790 107 ntBASIC-5.99□□□□□ -3.37
Trav15-1-dv6-1Q5R1D2 Gm23210-201ENSMUST00000158668 98 ntBASIC-6.06□□□□□ -3.38
Trav15-1-dv6-1Q5R1D2 Gm23237-201ENSMUST00000104639 92 ntBASIC-6.07□□□□□ -3.38
Trav15-1-dv6-1Q5R1D2 Gm26259-201ENSMUST00000104778 97 ntBASIC-6.11□□□□□ -3.39
Trav15-1-dv6-1Q5R1D2 Gm25254-201ENSMUST00000157239 104 ntBASIC-6.27□□□□□ -3.41
Trav15-1-dv6-1Q5R1D2 Gm22033-201ENSMUST00000116947 90 ntBASIC-6.34□□□□□ -3.42
Trav15-1-dv6-1Q5R1D2 Gm20473-201ENSMUST00000173064 112 ntBASIC-6.55□□□□□ -3.46
Trav15-1-dv6-1Q5R1D2 Gm22540-201ENSMUST00000158168 117 ntBASIC-6.6□□□□□ -3.47
Trav15-1-dv6-1Q5R1D2 Gm25049-201ENSMUST00000158597 73 ntBASIC-6.63□□□□□ -3.47
Trav15-1-dv6-1Q5R1D2 Gm25045-201ENSMUST00000122670 99 ntBASIC-6.68□□□□□ -3.48
Trav15-1-dv6-1Q5R1D2 Gm25950-201ENSMUST00000175331 100 ntBASIC-6.77□□□□□ -3.49
Trav15-1-dv6-1Q5R1D2 n-R5s214-201ENSMUST00000122494 121 ntBASIC-6.79□□□□□ -3.5
Trav15-1-dv6-1Q5R1D2 Gm25039-201ENSMUST00000082933 107 ntBASIC-6.81□□□□□ -3.5
Trav15-1-dv6-1Q5R1D2 Gm22069-201ENSMUST00000179911 107 ntBASIC-7.28□□□□□ -3.57
Trav15-1-dv6-1Q5R1D2 Gm23248-201ENSMUST00000083367 108 ntBASIC-7.37□□□□□ -3.59
Trav15-1-dv6-1Q5R1D2 Gm24531-201ENSMUST00000157945 100 ntBASIC-7.54□□□□□ -3.62
Trav15-1-dv6-1Q5R1D2 Gm22943-201ENSMUST00000158564 76 ntBASIC-7.69□□□□□ -3.64
Trav15-1-dv6-1Q5R1D2 Gm22593-201ENSMUST00000104245 109 ntBASIC-7.7□□□□□ -3.64
Trav15-1-dv6-1Q5R1D2 Gm27645-201ENSMUST00000183348 77 ntBASIC-8.3□□□□□ -3.74
Trav15-1-dv6-1Q5R1D2 AC160976.1-201ENSMUST00000215092 148 ntBASIC-8.76□□□□□ -3.81
Trav15-1-dv6-1Q5R1D2 Gm23125-201ENSMUST00000157651 106 ntBASIC-8.85□□□□□ -3.83
Trav15-1-dv6-1Q5R1D2 Gm25886-201ENSMUST00000157780 114 ntBASIC-9.22□□□□□ -3.89
Retrieved 32 of 76,532 protein–RNA pairs in 8.4 ms