Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Mir467e-201ENSMUST00000103760 87 ntBASIC-2.26□□□□□ -2.77
Ddb1Q3U1J4 Mir6395-201ENSMUST00000183885 91 ntBASIC-2.26□□□□□ -2.77
Ddb1Q3U1J4 Mir7218-201ENSMUST00000200050 59 ntBASIC-2.28□□□□□ -2.77
Ddb1Q3U1J4 Gm44377-201ENSMUST00000199039 87 ntBASIC-2.3□□□□□ -2.78
Ddb1Q3U1J4 Gm23421-201ENSMUST00000158934 104 ntBASIC-2.31□□□□□ -2.78
Ddb1Q3U1J4 Gm22402-201ENSMUST00000174920 110 ntBASIC-2.31□□□□□ -2.78
Ddb1Q3U1J4 Gm22385-201ENSMUST00000158189 101 ntBASIC-2.33□□□□□ -2.78
Ddb1Q3U1J4 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-2.37□□□□□ -2.79
Ddb1Q3U1J4 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-2.37□□□□□ -2.79
Ddb1Q3U1J4 Gm22183-201ENSMUST00000175420 73 ntBASIC-2.38□□□□□ -2.79
Ddb1Q3U1J4 Gm27671-201ENSMUST00000183739 66 ntBASIC-2.4□□□□□ -2.79
Ddb1Q3U1J4 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-2.41□□□□□ -2.8
Ddb1Q3U1J4 Gm27995-201ENSMUST00000184402 100 ntBASIC-2.42□□□□□ -2.8
Ddb1Q3U1J4 Gm26307-201ENSMUST00000157767 126 ntBASIC-2.43□□□□□ -2.8
Ddb1Q3U1J4 Mir154-201ENSMUST00000083514 66 ntBASIC-2.43□□□□□ -2.8
Ddb1Q3U1J4 Gm23125-201ENSMUST00000157651 106 ntBASIC-2.45□□□□□ -2.8
Ddb1Q3U1J4 Gm23566-201ENSMUST00000174907 108 ntBASIC-2.45□□□□□ -2.8
Ddb1Q3U1J4 Gm23637-201ENSMUST00000175075 94 ntBASIC-2.49□□□□□ -2.81
Ddb1Q3U1J4 Gm22566-201ENSMUST00000175541 85 ntBASIC-2.61□□□□□ -2.83
Ddb1Q3U1J4 Gm24538-201ENSMUST00000082612 107 ntBASIC-2.78□□□□□ -2.85
Ddb1Q3U1J4 Gm23210-201ENSMUST00000158668 98 ntBASIC-2.85□□□□□ -2.87
Ddb1Q3U1J4 Mir2136-201ENSMUST00000158781 75 ntBASIC-2.85□□□□□ -2.87
Ddb1Q3U1J4 Mir335-201ENSMUST00000083567 98 ntBASIC-2.86□□□□□ -2.87
Ddb1Q3U1J4 Gm25905-201ENSMUST00000158490 101 ntBASIC-2.87□□□□□ -2.87
Ddb1Q3U1J4 Gm25297-201ENSMUST00000175490 67 ntBASIC-2.99□□□□□ -2.89
Ddb1Q3U1J4 Gm23248-201ENSMUST00000083367 108 ntBASIC-3.04□□□□□ -2.9
Ddb1Q3U1J4 n-R5s218-201ENSMUST00000122583 109 ntBASIC-3.06□□□□□ -2.9
Ddb1Q3U1J4 Mir351-201ENSMUST00000083569 99 ntBASIC-3.1□□□□□ -2.91
Ddb1Q3U1J4 Gm23676-201ENSMUST00000157314 105 ntBASIC-3.11□□□□□ -2.91
Ddb1Q3U1J4 Gm25039-201ENSMUST00000082933 107 ntBASIC-3.13□□□□□ -2.91
Ddb1Q3U1J4 n-R5s214-201ENSMUST00000122494 121 ntBASIC-3.58□□□□□ -2.98
Ddb1Q3U1J4 n-R5s155-201ENSMUST00000122531 113 ntBASIC-3.67□□□□□ -3
Retrieved 32 of 76,532 protein–RNA pairs in 177.4 ms