Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm22060-201ENSMUST00000082558 107 ntBASIC-5.05□□□□□ -3.22
Hmgb1P63158 n-R5s218-201ENSMUST00000122583 109 ntBASIC-5.12□□□□□ -3.23
Hmgb1P63158 Gm24396-201ENSMUST00000116905 93 ntBASIC-5.14□□□□□ -3.23
Hmgb1P63158 Gm25521-201ENSMUST00000158393 108 ntBASIC-5.19□□□□□ -3.24
Hmgb1P63158 Gm24194-201ENSMUST00000116805 90 ntBASIC-5.23□□□□□ -3.25
Hmgb1P63158 Gm23826-201ENSMUST00000157394 119 ntBASIC-5.25□□□□□ -3.25
Hmgb1P63158 Gm44303-201ENSMUST00000196348 83 ntBASIC-5.25□□□□□ -3.25
Hmgb1P63158 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-5.27□□□□□ -3.25
Hmgb1P63158 Gm25354-201ENSMUST00000179110 105 ntBASIC-5.29□□□□□ -3.26
Hmgb1P63158 Gm23210-201ENSMUST00000158668 98 ntBASIC-5.33□□□□□ -3.26
Hmgb1P63158 Gm25132-201ENSMUST00000082652 107 ntBASIC-5.37□□□□□ -3.27
Hmgb1P63158 Gm22067-201ENSMUST00000122790 107 ntBASIC-5.43□□□□□ -3.28
Hmgb1P63158 Gm25254-201ENSMUST00000157239 104 ntBASIC-5.47□□□□□ -3.29
Hmgb1P63158 Gm26259-201ENSMUST00000104778 97 ntBASIC-5.48□□□□□ -3.29
Hmgb1P63158 Gm23237-201ENSMUST00000104639 92 ntBASIC-5.54□□□□□ -3.3
Hmgb1P63158 Gm22033-201ENSMUST00000116947 90 ntBASIC-5.75□□□□□ -3.33
Hmgb1P63158 Gm20473-201ENSMUST00000173064 112 ntBASIC-5.89□□□□□ -3.35
Hmgb1P63158 Gm25049-201ENSMUST00000158597 73 ntBASIC-5.93□□□□□ -3.36
Hmgb1P63158 Gm25039-201ENSMUST00000082933 107 ntBASIC-5.97□□□□□ -3.37
Hmgb1P63158 n-R5s214-201ENSMUST00000122494 121 ntBASIC-6.09□□□□□ -3.38
Hmgb1P63158 Gm22540-201ENSMUST00000158168 117 ntBASIC-6.1□□□□□ -3.39
Hmgb1P63158 Gm25045-201ENSMUST00000122670 99 ntBASIC-6.12□□□□□ -3.39
Hmgb1P63158 Gm25950-201ENSMUST00000175331 100 ntBASIC-6.16□□□□□ -3.4
Hmgb1P63158 Gm23248-201ENSMUST00000083367 108 ntBASIC-6.48□□□□□ -3.45
Hmgb1P63158 Gm22069-201ENSMUST00000179911 107 ntBASIC-6.67□□□□□ -3.48
Hmgb1P63158 Gm24531-201ENSMUST00000157945 100 ntBASIC-6.69□□□□□ -3.48
Hmgb1P63158 Gm22593-201ENSMUST00000104245 109 ntBASIC-6.9□□□□□ -3.51
Hmgb1P63158 Gm22943-201ENSMUST00000158564 76 ntBASIC-7.03□□□□□ -3.53
Hmgb1P63158 Gm27645-201ENSMUST00000183348 77 ntBASIC-7.23□□□□□ -3.57
Hmgb1P63158 Gm23125-201ENSMUST00000157651 106 ntBASIC-7.82□□□□□ -3.66
Hmgb1P63158 AC160976.1-201ENSMUST00000215092 148 ntBASIC-7.87□□□□□ -3.67
Hmgb1P63158 Gm25886-201ENSMUST00000157780 114 ntBASIC-8.23□□□□□ -3.73
Retrieved 32 of 76,532 protein–RNA pairs in 7.8 ms