Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm27882-201ENSMUST00000184904 74 ntBASIC-2.01□□□□□ -2.73
Shmt1P50431 Mir485-201ENSMUST00000093620 73 ntBASIC-2.02□□□□□ -2.73
Shmt1P50431 Gm26008-201ENSMUST00000158797 99 ntBASIC-2.03□□□□□ -2.73
Shmt1P50431 Gm23566-201ENSMUST00000174907 108 ntBASIC-2.03□□□□□ -2.73
Shmt1P50431 Mir124a-1-201ENSMUST00000083663 85 ntBASIC-2.05□□□□□ -2.74
Shmt1P50431 Gm23637-201ENSMUST00000175075 94 ntBASIC-2.07□□□□□ -2.74
Shmt1P50431 Gm22566-201ENSMUST00000175541 85 ntBASIC-2.07□□□□□ -2.74
Shmt1P50431 Mir467e-201ENSMUST00000103760 87 ntBASIC-2.1□□□□□ -2.75
Shmt1P50431 Gm25254-201ENSMUST00000157239 104 ntBASIC-2.16□□□□□ -2.76
Shmt1P50431 Mir6395-201ENSMUST00000183885 91 ntBASIC-2.18□□□□□ -2.76
Shmt1P50431 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-2.19□□□□□ -2.76
Shmt1P50431 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-2.19□□□□□ -2.76
Shmt1P50431 Gm22402-201ENSMUST00000174920 110 ntBASIC-2.19□□□□□ -2.76
Shmt1P50431 Gm26231-201ENSMUST00000175218 67 ntBASIC-2.19□□□□□ -2.76
Shmt1P50431 Gm24538-201ENSMUST00000082612 107 ntBASIC-2.21□□□□□ -2.76
Shmt1P50431 Gm23125-201ENSMUST00000157651 106 ntBASIC-2.24□□□□□ -2.77
Shmt1P50431 Mir335-201ENSMUST00000083567 98 ntBASIC-2.26□□□□□ -2.77
Shmt1P50431 Gm27995-201ENSMUST00000184402 100 ntBASIC-2.27□□□□□ -2.77
Shmt1P50431 Gm25905-201ENSMUST00000158490 101 ntBASIC-2.31□□□□□ -2.78
Shmt1P50431 Gm27671-201ENSMUST00000183739 66 ntBASIC-2.32□□□□□ -2.78
Shmt1P50431 Mir154-201ENSMUST00000083514 66 ntBASIC-2.33□□□□□ -2.78
Shmt1P50431 Gm26307-201ENSMUST00000157767 126 ntBASIC-2.42□□□□□ -2.8
Shmt1P50431 Mir351-201ENSMUST00000083569 99 ntBASIC-2.43□□□□□ -2.8
Shmt1P50431 Gm25297-201ENSMUST00000175490 67 ntBASIC-2.44□□□□□ -2.8
Shmt1P50431 Mir2136-201ENSMUST00000158781 75 ntBASIC-2.62□□□□□ -2.83
Shmt1P50431 Gm23676-201ENSMUST00000157314 105 ntBASIC-2.7□□□□□ -2.84
Shmt1P50431 n-R5s155-201ENSMUST00000122531 113 ntBASIC-2.78□□□□□ -2.85
Shmt1P50431 n-R5s218-201ENSMUST00000122583 109 ntBASIC-2.78□□□□□ -2.85
Shmt1P50431 Gm23248-201ENSMUST00000083367 108 ntBASIC-2.88□□□□□ -2.87
Shmt1P50431 Gm23210-201ENSMUST00000158668 98 ntBASIC-2.92□□□□□ -2.88
Shmt1P50431 Gm25039-201ENSMUST00000082933 107 ntBASIC-2.99□□□□□ -2.89
Shmt1P50431 n-R5s214-201ENSMUST00000122494 121 ntBASIC-3.55□□□□□ -2.98
Retrieved 32 of 76,532 protein–RNA pairs in 6.6 ms