Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Mir154-201ENSMUST00000083514 66 ntBASIC-0.68□□□□□ -2.52
Col18a1P39061 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-0.69□□□□□ -2.52
Col18a1P39061 Mir7218-201ENSMUST00000200050 59 ntBASIC-0.69□□□□□ -2.52
Col18a1P39061 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-0.7□□□□□ -2.52
Col18a1P39061 Gm25905-201ENSMUST00000158490 101 ntBASIC-0.7□□□□□ -2.52
Col18a1P39061 Gm24554-201ENSMUST00000158654 73 ntBASIC-0.7□□□□□ -2.52
Col18a1P39061 Mir7015-201ENSMUST00000199525 64 ntBASIC-0.71□□□□□ -2.52
Col18a1P39061 Mir485-201ENSMUST00000093620 73 ntBASIC-0.8□□□□□ -2.54
Col18a1P39061 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-0.8□□□□□ -2.54
Col18a1P39061 Gm23210-201ENSMUST00000158668 98 ntBASIC-0.8□□□□□ -2.54
Col18a1P39061 Gm26125-201ENSMUST00000083357 107 ntBASIC-0.8□□□□□ -2.54
Col18a1P39061 Gm22566-201ENSMUST00000175541 85 ntBASIC-0.82□□□□□ -2.54
Col18a1P39061 Gm26307-201ENSMUST00000157767 126 ntBASIC-0.84□□□□□ -2.54
Col18a1P39061 Mir467e-201ENSMUST00000103760 87 ntBASIC-0.86□□□□□ -2.55
Col18a1P39061 Gm22385-201ENSMUST00000158189 101 ntBASIC-0.88□□□□□ -2.55
Col18a1P39061 Gm22402-201ENSMUST00000174920 110 ntBASIC-0.88□□□□□ -2.55
Col18a1P39061 Gm44377-201ENSMUST00000199039 87 ntBASIC-0.98□□□□□ -2.57
Col18a1P39061 Gm23751-201ENSMUST00000157583 136 ntBASIC-1.01□□□□□ -2.57
Col18a1P39061 n-R5s155-201ENSMUST00000122531 113 ntBASIC-1.02□□□□□ -2.57
Col18a1P39061 Gm27995-201ENSMUST00000184402 100 ntBASIC-1.03□□□□□ -2.57
Col18a1P39061 Gm23676-201ENSMUST00000157314 105 ntBASIC-1.06□□□□□ -2.58
Col18a1P39061 Gm22183-201ENSMUST00000175420 73 ntBASIC-1.07□□□□□ -2.58
Col18a1P39061 Gm44351-201ENSMUST00000200090 95 ntBASIC-1.07□□□□□ -2.58
Col18a1P39061 Gm23566-201ENSMUST00000174907 108 ntBASIC-1.11□□□□□ -2.59
Col18a1P39061 Gm23637-201ENSMUST00000175075 94 ntBASIC-1.12□□□□□ -2.59
Col18a1P39061 Gm25297-201ENSMUST00000175490 67 ntBASIC-1.13□□□□□ -2.59
Col18a1P39061 Mir2136-201ENSMUST00000158781 75 ntBASIC-1.15□□□□□ -2.59
Col18a1P39061 Mir351-201ENSMUST00000083569 99 ntBASIC-1.16□□□□□ -2.6
Col18a1P39061 Mir335-201ENSMUST00000083567 98 ntBASIC-1.18□□□□□ -2.6
Col18a1P39061 Gm24538-201ENSMUST00000082612 107 ntBASIC-1.22□□□□□ -2.6
Col18a1P39061 n-R5s214-201ENSMUST00000122494 121 ntBASIC-1.29□□□□□ -2.62
Col18a1P39061 n-R5s218-201ENSMUST00000122583 109 ntBASIC-1.34□□□□□ -2.62
Retrieved 32 of 76,532 protein–RNA pairs in 8.7 ms