Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.37□□□□□ -2.47
Usp40Q8BWR4 Gm23199-201ENSMUST00000158812 107 ntBASIC-0.37□□□□□ -2.47
Usp40Q8BWR4 Gm26131-201ENSMUST00000082725 110 ntBASIC-0.37□□□□□ -2.47
Usp40Q8BWR4 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.39□□□□□ -2.47
Usp40Q8BWR4 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.39□□□□□ -2.47
Usp40Q8BWR4 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.4□□□□□ -2.47
Usp40Q8BWR4 Mir183-201ENSMUST00000083685 70 ntBASIC-0.4□□□□□ -2.47
Usp40Q8BWR4 Gm43943-201ENSMUST00000204201 113 ntBASIC-0.41□□□□□ -2.48
Usp40Q8BWR4 Gm23556-201ENSMUST00000157821 92 ntBASIC-0.42□□□□□ -2.48
Usp40Q8BWR4 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.43□□□□□ -2.48
Usp40Q8BWR4 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.43□□□□□ -2.48
Usp40Q8BWR4 Gm44311-201ENSMUST00000196448 69 ntBASIC-0.43□□□□□ -2.48
Usp40Q8BWR4 Gm22573-201ENSMUST00000082982 102 ntBASIC-0.43□□□□□ -2.48
Usp40Q8BWR4 Gm26233-201ENSMUST00000175530 70 ntBASIC-0.44□□□□□ -2.48
Usp40Q8BWR4 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.44□□□□□ -2.48
Usp40Q8BWR4 Mir1912-201ENSMUST00000175298 87 ntBASIC-0.45□□□□□ -2.48
Usp40Q8BWR4 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.45□□□□□ -2.48
Usp40Q8BWR4 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-0.45□□□□□ -2.48
Usp40Q8BWR4 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-0.45□□□□□ -2.48
Usp40Q8BWR4 Gm22813-202ENSMUST00000200346 124 ntBASIC-0.48□□□□□ -2.49
Usp40Q8BWR4 Gm22783-201ENSMUST00000104089 107 ntBASIC-0.49□□□□□ -2.49
Usp40Q8BWR4 Gm24704-201ENSMUST00000093715 107 ntBASIC-0.49□□□□□ -2.49
Usp40Q8BWR4 Gm23974-201ENSMUST00000083321 131 ntBASIC-0.5□□□□□ -2.49
Usp40Q8BWR4 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.5□□□□□ -2.49
Usp40Q8BWR4 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-0.51□□□□□ -2.49
Usp40Q8BWR4 Gm22489-201ENSMUST00000116813 62 ntBASIC-0.51□□□□□ -2.49
Usp40Q8BWR4 Gm23216-201ENSMUST00000179545 107 ntBASIC-0.51□□□□□ -2.49
Usp40Q8BWR4 Mir6961-201ENSMUST00000183874 67 ntBASIC-0.51□□□□□ -2.49
Usp40Q8BWR4 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.52□□□□□ -2.49
Usp40Q8BWR4 Gm23831-201ENSMUST00000158895 85 ntBASIC-0.53□□□□□ -2.49
Usp40Q8BWR4 Gm27366-201ENSMUST00000184967 108 ntBASIC-0.53□□□□□ -2.49
Usp40Q8BWR4 Gm27610-201ENSMUST00000184026 74 ntBASIC-0.55□□□□□ -2.5
Usp40Q8BWR4 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.56□□□□□ -2.5
Usp40Q8BWR4 Mir7043-201ENSMUST00000184219 70 ntBASIC-0.58□□□□□ -2.5
Usp40Q8BWR4 Mir145b-201ENSMUST00000184434 75 ntBASIC-0.61□□□□□ -2.51
Usp40Q8BWR4 Gm25601-201ENSMUST00000158356 105 ntBASIC-0.64□□□□□ -2.51
Usp40Q8BWR4 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-0.65□□□□□ -2.51
Usp40Q8BWR4 Gm22234-201ENSMUST00000174906 65 ntBASIC-0.65□□□□□ -2.51
Usp40Q8BWR4 Gm22464-201ENSMUST00000175273 64 ntBASIC-0.65□□□□□ -2.51
Usp40Q8BWR4 Mir543-201ENSMUST00000102286 76 ntBASIC-0.67□□□□□ -2.52
Usp40Q8BWR4 Mir574-201ENSMUST00000103854 78 ntBASIC-0.67□□□□□ -2.52
Usp40Q8BWR4 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.67□□□□□ -2.52
Usp40Q8BWR4 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.68□□□□□ -2.52
Usp40Q8BWR4 Mir379-201ENSMUST00000083564 66 ntBASIC-0.68□□□□□ -2.52
Usp40Q8BWR4 Gm23428-201ENSMUST00000122488 102 ntBASIC-0.71□□□□□ -2.52
Usp40Q8BWR4 Gm22938-201ENSMUST00000103956 120 ntBASIC-0.72□□□□□ -2.52
Usp40Q8BWR4 Mir7055-201ENSMUST00000197423 59 ntBASIC-0.73□□□□□ -2.53
Usp40Q8BWR4 Gm25521-201ENSMUST00000158393 108 ntBASIC-0.74□□□□□ -2.53
Usp40Q8BWR4 Gm25254-201ENSMUST00000157239 104 ntBASIC-0.75□□□□□ -2.53
Usp40Q8BWR4 Gm23812-201ENSMUST00000175156 84 ntBASIC-0.76□□□□□ -2.53
Usp40Q8BWR4 Gm23374-201ENSMUST00000175408 84 ntBASIC-0.76□□□□□ -2.53
Usp40Q8BWR4 Gm25248-201ENSMUST00000175473 98 ntBASIC-0.76□□□□□ -2.53
Usp40Q8BWR4 Gm22296-201ENSMUST00000083310 103 ntBASIC-0.76□□□□□ -2.53
Usp40Q8BWR4 Mir493-201ENSMUST00000103837 83 ntBASIC-0.78□□□□□ -2.53
Usp40Q8BWR4 Gm25867-201ENSMUST00000158254 103 ntBASIC-0.79□□□□□ -2.54
Usp40Q8BWR4 Mir466m-201ENSMUST00000175052 84 ntBASIC-0.84□□□□□ -2.54
Usp40Q8BWR4 Gm25626-201ENSMUST00000177631 107 ntBASIC-0.86□□□□□ -2.55
Usp40Q8BWR4 Gm24091-201ENSMUST00000082550 83 ntBASIC-0.88□□□□□ -2.55
Usp40Q8BWR4 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-0.88□□□□□ -2.55
Usp40Q8BWR4 Gm23711-201ENSMUST00000083856 83 ntBASIC-0.88□□□□□ -2.55
Usp40Q8BWR4 Snord8-201ENSMUST00000175303 110 ntBASIC-0.91□□□□□ -2.56
Usp40Q8BWR4 Gm24016-201ENSMUST00000157726 68 ntBASIC-0.92□□□□□ -2.56
Usp40Q8BWR4 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-0.92□□□□□ -2.56
Usp40Q8BWR4 Mir124a-1-201ENSMUST00000083663 85 ntBASIC-0.92□□□□□ -2.56
Usp40Q8BWR4 Gm27944-201ENSMUST00000185155 103 ntBASIC-0.93□□□□□ -2.56
Usp40Q8BWR4 Gm26122-201ENSMUST00000083362 82 ntBASIC-0.94□□□□□ -2.56
Usp40Q8BWR4 Gm26043-201ENSMUST00000116912 91 ntBASIC-0.95□□□□□ -2.56
Usp40Q8BWR4 Mir122-201ENSMUST00000083468 66 ntBASIC-0.95□□□□□ -2.56
Usp40Q8BWR4 Gm23316-201ENSMUST00000157997 114 ntBASIC-0.97□□□□□ -2.56
Usp40Q8BWR4 Gm26008-201ENSMUST00000158797 99 ntBASIC-0.97□□□□□ -2.56
Usp40Q8BWR4 Mir6339-201ENSMUST00000185120 117 ntBASIC-0.97□□□□□ -2.56
Usp40Q8BWR4 Gm24197-201ENSMUST00000175085 109 ntBASIC-0.99□□□□□ -2.57
Usp40Q8BWR4 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1□□□□□ -2.57
Usp40Q8BWR4 Gm27882-201ENSMUST00000184904 74 ntBASIC-1□□□□□ -2.57
Usp40Q8BWR4 Mir6964-201ENSMUST00000200252 59 ntBASIC-1□□□□□ -2.57
Usp40Q8BWR4 Gm23613-201ENSMUST00000082596 87 ntBASIC-1□□□□□ -2.57
Usp40Q8BWR4 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-1.01□□□□□ -2.57
Usp40Q8BWR4 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.04□□□□□ -2.58
Usp40Q8BWR4 Gm24047-201ENSMUST00000102405 104 ntBASIC-1.07□□□□□ -2.58
Usp40Q8BWR4 Gm24631-201ENSMUST00000122765 81 ntBASIC-1.07□□□□□ -2.58
Usp40Q8BWR4 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.11□□□□□ -2.59
Usp40Q8BWR4 Gm23707-201ENSMUST00000104366 125 ntBASIC-1.13□□□□□ -2.59
Usp40Q8BWR4 Mir466o-201ENSMUST00000104832 84 ntBASIC-1.14□□□□□ -2.59
Usp40Q8BWR4 Gm27671-201ENSMUST00000183739 66 ntBASIC-1.15□□□□□ -2.59
Usp40Q8BWR4 Gm24806-201ENSMUST00000117036 90 ntBASIC-1.17□□□□□ -2.6
Usp40Q8BWR4 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.17□□□□□ -2.6
Usp40Q8BWR4 Gm22446-201ENSMUST00000180108 104 ntBASIC-1.18□□□□□ -2.6
Usp40Q8BWR4 Mir7670-201ENSMUST00000183689 69 ntBASIC-1.18□□□□□ -2.6
Usp40Q8BWR4 Mir470-201ENSMUST00000093565 75 ntBASIC-1.18□□□□□ -2.6
Usp40Q8BWR4 Gm24185-201ENSMUST00000122578 105 ntBASIC-1.19□□□□□ -2.6
Usp40Q8BWR4 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.19□□□□□ -2.6
Usp40Q8BWR4 Gm23066-201ENSMUST00000158237 71 ntBASIC-1.23□□□□□ -2.61
Usp40Q8BWR4 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.23□□□□□ -2.61
Usp40Q8BWR4 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.23□□□□□ -2.61
Usp40Q8BWR4 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.24□□□□□ -2.61
Usp40Q8BWR4 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-1.31□□□□□ -2.62
Usp40Q8BWR4 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-1.31□□□□□ -2.62
Usp40Q8BWR4 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.32□□□□□ -2.62
Usp40Q8BWR4 Mir6395-201ENSMUST00000183885 91 ntBASIC-1.34□□□□□ -2.62
Usp40Q8BWR4 Mir485-201ENSMUST00000093620 73 ntBASIC-1.35□□□□□ -2.63
Retrieved 100 of 76,532 protein–RNA pairs in 153.7 ms