Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Mir214-201ENSMUST00000083582 110 ntBASIC0.03□□□□□ -2.4
Col18a1P39061 Snora16a-202ENSMUST00000196061 137 ntBASIC0.01□□□□□ -2.41
Col18a1P39061 Gm25703-201ENSMUST00000083123 151 ntBASIC0.01□□□□□ -2.41
Col18a1P39061 Gm22077-201ENSMUST00000157594 93 ntBASIC0□□□□□ -2.41
Col18a1P39061 Gm25867-201ENSMUST00000158254 103 ntBASIC0□□□□□ -2.41
Col18a1P39061 Snord123-201ENSMUST00000158692 71 ntBASIC-0.01□□□□□ -2.41
Col18a1P39061 Gm24091-201ENSMUST00000082550 83 ntBASIC-0.01□□□□□ -2.41
Col18a1P39061 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.01□□□□□ -2.41
Col18a1P39061 Gm22296-201ENSMUST00000083310 103 ntBASIC-0.01□□□□□ -2.41
Col18a1P39061 Gm23711-201ENSMUST00000083856 83 ntBASIC-0.01□□□□□ -2.41
Col18a1P39061 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.02□□□□□ -2.41
Col18a1P39061 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.04□□□□□ -2.42
Col18a1P39061 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.04□□□□□ -2.42
Col18a1P39061 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.05□□□□□ -2.42
Col18a1P39061 Gm23308-201ENSMUST00000179475 107 ntBASIC-0.05□□□□□ -2.42
Col18a1P39061 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.06□□□□□ -2.42
Col18a1P39061 Mir183-201ENSMUST00000083685 70 ntBASIC-0.06□□□□□ -2.42
Col18a1P39061 Gm43943-201ENSMUST00000204201 113 ntBASIC-0.08□□□□□ -2.42
Col18a1P39061 Mir493-201ENSMUST00000103837 83 ntBASIC-0.09□□□□□ -2.42
Col18a1P39061 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.09□□□□□ -2.42
Col18a1P39061 Gm24714-201ENSMUST00000102382 101 ntBASIC-0.09□□□□□ -2.42
Col18a1P39061 Gm22234-201ENSMUST00000174906 65 ntBASIC-0.09□□□□□ -2.42
Col18a1P39061 Gm23974-201ENSMUST00000083321 131 ntBASIC-0.09□□□□□ -2.42
Col18a1P39061 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.11□□□□□ -2.43
Col18a1P39061 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.11□□□□□ -2.43
Col18a1P39061 Mir302c-201ENSMUST00000083548 68 ntBASIC-0.14□□□□□ -2.43
Col18a1P39061 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.14□□□□□ -2.43
Col18a1P39061 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.14□□□□□ -2.43
Col18a1P39061 Gm27610-201ENSMUST00000184026 74 ntBASIC-0.15□□□□□ -2.43
Col18a1P39061 Gm26131-201ENSMUST00000082725 110 ntBASIC-0.16□□□□□ -2.43
Col18a1P39061 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.17□□□□□ -2.44
Col18a1P39061 Gm23428-201ENSMUST00000122488 102 ntBASIC-0.18□□□□□ -2.44
Col18a1P39061 Mir7043-201ENSMUST00000184219 70 ntBASIC-0.18□□□□□ -2.44
Col18a1P39061 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.18□□□□□ -2.44
Col18a1P39061 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.19□□□□□ -2.44
Col18a1P39061 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.19□□□□□ -2.44
Col18a1P39061 Mir124a-1-201ENSMUST00000083663 85 ntBASIC-0.19□□□□□ -2.44
Col18a1P39061 Gm24704-201ENSMUST00000093715 107 ntBASIC-0.19□□□□□ -2.44
Col18a1P39061 Gm26008-201ENSMUST00000158797 99 ntBASIC-0.2□□□□□ -2.44
Col18a1P39061 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.2□□□□□ -2.44
Col18a1P39061 Mir543-201ENSMUST00000102286 76 ntBASIC-0.21□□□□□ -2.44
Col18a1P39061 Gm26043-201ENSMUST00000116912 91 ntBASIC-0.21□□□□□ -2.44
Col18a1P39061 Mir379-201ENSMUST00000083564 66 ntBASIC-0.22□□□□□ -2.44
Col18a1P39061 Gm23812-201ENSMUST00000175156 84 ntBASIC-0.22□□□□□ -2.45
Col18a1P39061 Gm22464-201ENSMUST00000175273 64 ntBASIC-0.22□□□□□ -2.45
Col18a1P39061 Gm23374-201ENSMUST00000175408 84 ntBASIC-0.22□□□□□ -2.45
Col18a1P39061 Gm44311-201ENSMUST00000196448 69 ntBASIC-0.23□□□□□ -2.45
Col18a1P39061 Gm23248-201ENSMUST00000083367 108 ntBASIC-0.24□□□□□ -2.45
Col18a1P39061 Mir145b-201ENSMUST00000184434 75 ntBASIC-0.24□□□□□ -2.45
Col18a1P39061 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.27□□□□□ -2.45
Col18a1P39061 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.27□□□□□ -2.45
Col18a1P39061 Mir6961-201ENSMUST00000183874 67 ntBASIC-0.27□□□□□ -2.45
Col18a1P39061 Gm22813-202ENSMUST00000200346 124 ntBASIC-0.27□□□□□ -2.45
Col18a1P39061 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.27□□□□□ -2.45
Col18a1P39061 Gm24631-201ENSMUST00000122765 81 ntBASIC-0.29□□□□□ -2.46
Col18a1P39061 Gm24016-201ENSMUST00000157726 68 ntBASIC-0.29□□□□□ -2.46
Col18a1P39061 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-0.29□□□□□ -2.46
Col18a1P39061 Gm26233-201ENSMUST00000175530 70 ntBASIC-0.29□□□□□ -2.46
Col18a1P39061 Gm27671-201ENSMUST00000183739 66 ntBASIC-0.29□□□□□ -2.46
Col18a1P39061 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.29□□□□□ -2.46
Col18a1P39061 Gm23216-201ENSMUST00000179545 107 ntBASIC-0.29□□□□□ -2.46
Col18a1P39061 Mir6964-201ENSMUST00000200252 59 ntBASIC-0.3□□□□□ -2.46
Col18a1P39061 Gm23335-201ENSMUST00000117021 90 ntBASIC-0.31□□□□□ -2.46
Col18a1P39061 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.32□□□□□ -2.46
Col18a1P39061 Gm26122-201ENSMUST00000083362 82 ntBASIC-0.32□□□□□ -2.46
Col18a1P39061 Gm24197-201ENSMUST00000175085 109 ntBASIC-0.33□□□□□ -2.46
Col18a1P39061 Snord8-201ENSMUST00000175303 110 ntBASIC-0.34□□□□□ -2.46
Col18a1P39061 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.35□□□□□ -2.47
Col18a1P39061 Gm23831-201ENSMUST00000158895 85 ntBASIC-0.36□□□□□ -2.47
Col18a1P39061 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-0.39□□□□□ -2.47
Col18a1P39061 Mir7055-201ENSMUST00000197423 59 ntBASIC-0.39□□□□□ -2.47
Col18a1P39061 Gm27882-201ENSMUST00000184904 74 ntBASIC-0.4□□□□□ -2.47
Col18a1P39061 Gm23707-201ENSMUST00000104366 125 ntBASIC-0.45□□□□□ -2.48
Col18a1P39061 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-0.45□□□□□ -2.48
Col18a1P39061 Gm22446-201ENSMUST00000180108 104 ntBASIC-0.45□□□□□ -2.48
Col18a1P39061 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-0.47□□□□□ -2.48
Col18a1P39061 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-0.47□□□□□ -2.48
Col18a1P39061 Gm24185-201ENSMUST00000122578 105 ntBASIC-0.47□□□□□ -2.49
Col18a1P39061 Gm25039-201ENSMUST00000082933 107 ntBASIC-0.47□□□□□ -2.49
Col18a1P39061 Gm22938-201ENSMUST00000103956 120 ntBASIC-0.5□□□□□ -2.49
Col18a1P39061 Gm25626-201ENSMUST00000177631 107 ntBASIC-0.51□□□□□ -2.49
Col18a1P39061 Gm23316-201ENSMUST00000157997 114 ntBASIC-0.52□□□□□ -2.49
Col18a1P39061 Mir7670-201ENSMUST00000183689 69 ntBASIC-0.52□□□□□ -2.49
Col18a1P39061 Gm24806-201ENSMUST00000117036 90 ntBASIC-0.52□□□□□ -2.49
Col18a1P39061 Gm27944-201ENSMUST00000185155 103 ntBASIC-0.53□□□□□ -2.49
Col18a1P39061 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-0.54□□□□□ -2.5
Col18a1P39061 n-R5s153-201ENSMUST00000083451 116 ntBASIC-0.55□□□□□ -2.5
Col18a1P39061 Mir122-201ENSMUST00000083468 66 ntBASIC-0.55□□□□□ -2.5
Col18a1P39061 Gm23066-201ENSMUST00000158237 71 ntBASIC-0.56□□□□□ -2.5
Col18a1P39061 Mir6339-201ENSMUST00000185120 117 ntBASIC-0.57□□□□□ -2.5
Col18a1P39061 Gm27935-201ENSMUST00000183894 79 ntBASIC-0.6□□□□□ -2.5
Col18a1P39061 Gm26231-201ENSMUST00000175218 67 ntBASIC-0.6□□□□□ -2.51
Col18a1P39061 Mir451b-201ENSMUST00000196157 72 ntBASIC-0.6□□□□□ -2.51
Col18a1P39061 Gm23613-201ENSMUST00000082596 87 ntBASIC-0.6□□□□□ -2.51
Col18a1P39061 Mir466o-201ENSMUST00000104832 84 ntBASIC-0.62□□□□□ -2.51
Col18a1P39061 Gm22430-201ENSMUST00000158546 107 ntBASIC-0.62□□□□□ -2.51
Col18a1P39061 Gm23421-201ENSMUST00000158934 104 ntBASIC-0.63□□□□□ -2.51
Col18a1P39061 Mir6395-201ENSMUST00000183885 91 ntBASIC-0.65□□□□□ -2.51
Col18a1P39061 Mir470-201ENSMUST00000093565 75 ntBASIC-0.65□□□□□ -2.51
Col18a1P39061 Mir7086-201ENSMUST00000183683 65 ntBASIC-0.68□□□□□ -2.52
Retrieved 100 of 76,532 protein–RNA pairs in 497.6 ms