Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-0.42□□□□□ -2.48
Msx1P13297 Gm25493-201ENSMUST00000157375 103 ntBASIC-0.43□□□□□ -2.48
Msx1P13297 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.43□□□□□ -2.48
Msx1P13297 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.44□□□□□ -2.48
Msx1P13297 Mir183-201ENSMUST00000083685 70 ntBASIC-0.44□□□□□ -2.48
Msx1P13297 Mir7057-201ENSMUST00000184685 58 ntBASIC-0.45□□□□□ -2.48
Msx1P13297 Gm23166-201ENSMUST00000157164 101 ntBASIC-0.46□□□□□ -2.48
Msx1P13297 Gm24775-201ENSMUST00000157377 99 ntBASIC-0.46□□□□□ -2.48
Msx1P13297 Mir7043-201ENSMUST00000184219 70 ntBASIC-0.46□□□□□ -2.48
Msx1P13297 Mir539-201ENSMUST00000102109 74 ntBASIC-0.51□□□□□ -2.49
Msx1P13297 Gm24714-201ENSMUST00000102382 101 ntBASIC-0.53□□□□□ -2.49
Msx1P13297 Gm23812-201ENSMUST00000175156 84 ntBASIC-0.53□□□□□ -2.49
Msx1P13297 Gm23374-201ENSMUST00000175408 84 ntBASIC-0.53□□□□□ -2.49
Msx1P13297 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.54□□□□□ -2.5
Msx1P13297 Gm24051-201ENSMUST00000158622 75 ntBASIC-0.55□□□□□ -2.5
Msx1P13297 Gm24197-201ENSMUST00000175085 109 ntBASIC-0.55□□□□□ -2.5
Msx1P13297 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.55□□□□□ -2.5
Msx1P13297 Mir6964-201ENSMUST00000200252 59 ntBASIC-0.55□□□□□ -2.5
Msx1P13297 Gm23556-201ENSMUST00000157821 92 ntBASIC-0.56□□□□□ -2.5
Msx1P13297 Gm22313-201ENSMUST00000158008 129 ntBASIC-0.58□□□□□ -2.5
Msx1P13297 Gm23543-201ENSMUST00000158207 106 ntBASIC-0.58□□□□□ -2.5
Msx1P13297 Mir302c-201ENSMUST00000083548 68 ntBASIC-0.58□□□□□ -2.5
Msx1P13297 Gm26233-201ENSMUST00000175530 70 ntBASIC-0.59□□□□□ -2.5
Msx1P13297 Gm23335-201ENSMUST00000117021 90 ntBASIC-0.63□□□□□ -2.51
Msx1P13297 Gm44311-201ENSMUST00000196448 69 ntBASIC-0.63□□□□□ -2.51
Msx1P13297 Gm26131-201ENSMUST00000082725 110 ntBASIC-0.63□□□□□ -2.51
Msx1P13297 Snord123-201ENSMUST00000158692 71 ntBASIC-0.64□□□□□ -2.51
Msx1P13297 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.64□□□□□ -2.51
Msx1P13297 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.64□□□□□ -2.51
Msx1P13297 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.65□□□□□ -2.51
Msx1P13297 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.66□□□□□ -2.52
Msx1P13297 Gm23125-201ENSMUST00000157651 106 ntBASIC-0.67□□□□□ -2.52
Msx1P13297 Mir664-201ENSMUST00000196796 69 ntBASIC-0.67□□□□□ -2.52
Msx1P13297 Gm43943-201ENSMUST00000204201 113 ntBASIC-0.67□□□□□ -2.52
Msx1P13297 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-0.7□□□□□ -2.52
Msx1P13297 Gm22446-201ENSMUST00000180108 104 ntBASIC-0.71□□□□□ -2.52
Msx1P13297 Gm23974-201ENSMUST00000083321 131 ntBASIC-0.71□□□□□ -2.52
Msx1P13297 Gm26124-201ENSMUST00000083359 108 ntBASIC-0.71□□□□□ -2.52
Msx1P13297 Gm27366-201ENSMUST00000184967 108 ntBASIC-0.72□□□□□ -2.52
Msx1P13297 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.75□□□□□ -2.53
Msx1P13297 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-0.75□□□□□ -2.53
Msx1P13297 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-0.75□□□□□ -2.53
Msx1P13297 Gm22813-202ENSMUST00000200346 124 ntBASIC-0.76□□□□□ -2.53
Msx1P13297 Gm22573-201ENSMUST00000082982 102 ntBASIC-0.8□□□□□ -2.54
Msx1P13297 Mir6961-201ENSMUST00000183874 67 ntBASIC-0.81□□□□□ -2.54
Msx1P13297 Gm24704-201ENSMUST00000093715 107 ntBASIC-0.82□□□□□ -2.54
Msx1P13297 Snord8-201ENSMUST00000175303 110 ntBASIC-0.84□□□□□ -2.54
Msx1P13297 Gm22783-201ENSMUST00000104089 107 ntBASIC-0.86□□□□□ -2.55
Msx1P13297 Gm23831-201ENSMUST00000158895 85 ntBASIC-0.87□□□□□ -2.55
Msx1P13297 Gm23199-201ENSMUST00000158812 107 ntBASIC-0.89□□□□□ -2.55
Msx1P13297 Mir1912-201ENSMUST00000175298 87 ntBASIC-0.89□□□□□ -2.55
Msx1P13297 Mir543-201ENSMUST00000102286 76 ntBASIC-0.91□□□□□ -2.56
Msx1P13297 Gm22464-201ENSMUST00000175273 64 ntBASIC-0.94□□□□□ -2.56
Msx1P13297 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-0.95□□□□□ -2.56
Msx1P13297 Gm27944-201ENSMUST00000185155 103 ntBASIC-0.96□□□□□ -2.56
Msx1P13297 Gm22938-201ENSMUST00000103956 120 ntBASIC-0.99□□□□□ -2.57
Msx1P13297 Gm23216-201ENSMUST00000179545 107 ntBASIC-0.99□□□□□ -2.57
Msx1P13297 Gm23421-201ENSMUST00000158934 104 ntBASIC-1.01□□□□□ -2.57
Msx1P13297 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-1.06□□□□□ -2.58
Msx1P13297 Mir7055-201ENSMUST00000197423 59 ntBASIC-1.06□□□□□ -2.58
Msx1P13297 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-1.08□□□□□ -2.58
Msx1P13297 Gm25521-201ENSMUST00000158393 108 ntBASIC-1.09□□□□□ -2.58
Msx1P13297 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.09□□□□□ -2.58
Msx1P13297 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.11□□□□□ -2.59
Msx1P13297 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.12□□□□□ -2.59
Msx1P13297 Mir7218-201ENSMUST00000200050 59 ntBASIC-1.14□□□□□ -2.59
Msx1P13297 Mir379-201ENSMUST00000083564 66 ntBASIC-1.16□□□□□ -2.6
Msx1P13297 Gm22296-201ENSMUST00000083310 103 ntBASIC-1.17□□□□□ -2.6
Msx1P13297 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.18□□□□□ -2.6
Msx1P13297 Gm23428-201ENSMUST00000122488 102 ntBASIC-1.2□□□□□ -2.6
Msx1P13297 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.22□□□□□ -2.6
Msx1P13297 Gm23613-201ENSMUST00000082596 87 ntBASIC-1.22□□□□□ -2.6
Msx1P13297 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.24□□□□□ -2.61
Msx1P13297 Gm25867-201ENSMUST00000158254 103 ntBASIC-1.27□□□□□ -2.61
Msx1P13297 Mir493-201ENSMUST00000103837 83 ntBASIC-1.28□□□□□ -2.61
Msx1P13297 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.29□□□□□ -2.62
Msx1P13297 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.29□□□□□ -2.62
Msx1P13297 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.3□□□□□ -2.62
Msx1P13297 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.3□□□□□ -2.62
Msx1P13297 Mir6339-201ENSMUST00000185120 117 ntBASIC-1.31□□□□□ -2.62
Msx1P13297 Gm22566-201ENSMUST00000175541 85 ntBASIC-1.32□□□□□ -2.62
Msx1P13297 Gm26043-201ENSMUST00000116912 91 ntBASIC-1.36□□□□□ -2.63
Msx1P13297 Gm25254-201ENSMUST00000157239 104 ntBASIC-1.38□□□□□ -2.63
Msx1P13297 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.38□□□□□ -2.63
Msx1P13297 Gm24016-201ENSMUST00000157726 68 ntBASIC-1.39□□□□□ -2.63
Msx1P13297 Gm25905-201ENSMUST00000158490 101 ntBASIC-1.39□□□□□ -2.63
Msx1P13297 Gm26122-201ENSMUST00000083362 82 ntBASIC-1.4□□□□□ -2.63
Msx1P13297 Mir122-201ENSMUST00000083468 66 ntBASIC-1.43□□□□□ -2.64
Msx1P13297 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-1.46□□□□□ -2.64
Msx1P13297 Gm26008-201ENSMUST00000158797 99 ntBASIC-1.48□□□□□ -2.65
Msx1P13297 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.5□□□□□ -2.65
Msx1P13297 Gm23707-201ENSMUST00000104366 125 ntBASIC-1.52□□□□□ -2.65
Msx1P13297 Gm24631-201ENSMUST00000122765 81 ntBASIC-1.53□□□□□ -2.65
Msx1P13297 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.53□□□□□ -2.65
Msx1P13297 Gm27882-201ENSMUST00000184904 74 ntBASIC-1.58□□□□□ -2.66
Msx1P13297 Mir124a-1-201ENSMUST00000083663 85 ntBASIC-1.59□□□□□ -2.66
Msx1P13297 Gm24806-201ENSMUST00000117036 90 ntBASIC-1.62□□□□□ -2.67
Msx1P13297 Gm24185-201ENSMUST00000122578 105 ntBASIC-1.63□□□□□ -2.67
Msx1P13297 Gm23751-201ENSMUST00000157583 136 ntBASIC-1.67□□□□□ -2.68
Msx1P13297 Gm23066-201ENSMUST00000158237 71 ntBASIC-1.71□□□□□ -2.68
Retrieved 100 of 76,532 protein–RNA pairs in 149.1 ms