Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Snord8-201ENSMUST00000175303 110 ntBASIC-0.79□□□□□ -2.54
Lmx1bO88609 Gm22301-201ENSMUST00000082656 107 ntBASIC-0.79□□□□□ -2.54
Lmx1bO88609 Gm24704-201ENSMUST00000093715 107 ntBASIC-0.79□□□□□ -2.54
Lmx1bO88609 Gm23335-201ENSMUST00000117021 90 ntBASIC-0.8□□□□□ -2.54
Lmx1bO88609 Gm22938-201ENSMUST00000103956 120 ntBASIC-0.81□□□□□ -2.54
Lmx1bO88609 Mir6961-201ENSMUST00000183874 67 ntBASIC-0.81□□□□□ -2.54
Lmx1bO88609 Mir28c-201ENSMUST00000200096 75 ntBASIC-0.82□□□□□ -2.54
Lmx1bO88609 Gm24775-201ENSMUST00000157377 99 ntBASIC-0.84□□□□□ -2.54
Lmx1bO88609 Gm24051-201ENSMUST00000158622 75 ntBASIC-0.84□□□□□ -2.54
Lmx1bO88609 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-0.84□□□□□ -2.54
Lmx1bO88609 Gm43943-201ENSMUST00000204201 113 ntBASIC-0.84□□□□□ -2.54
Lmx1bO88609 Gm26306-201ENSMUST00000157773 119 ntBASIC-0.85□□□□□ -2.55
Lmx1bO88609 Snord123-201ENSMUST00000158692 71 ntBASIC-0.87□□□□□ -2.55
Lmx1bO88609 Gm23199-201ENSMUST00000158812 107 ntBASIC-0.87□□□□□ -2.55
Lmx1bO88609 Gm23974-201ENSMUST00000083321 131 ntBASIC-0.88□□□□□ -2.55
Lmx1bO88609 Gm22550-201ENSMUST00000179774 107 ntBASIC-0.89□□□□□ -2.55
Lmx1bO88609 Gm22060-201ENSMUST00000082558 107 ntBASIC-0.89□□□□□ -2.55
Lmx1bO88609 Gm23216-201ENSMUST00000179545 107 ntBASIC-0.9□□□□□ -2.55
Lmx1bO88609 Gm27944-201ENSMUST00000185155 103 ntBASIC-0.9□□□□□ -2.55
Lmx1bO88609 Gm26227-201ENSMUST00000082510 101 ntBASIC-0.9□□□□□ -2.55
Lmx1bO88609 Mir192-201ENSMUST00000083589 89 ntBASIC-0.9□□□□□ -2.55
Lmx1bO88609 Gm26124-201ENSMUST00000083359 108 ntBASIC-0.92□□□□□ -2.56
Lmx1bO88609 Gm23315-201ENSMUST00000158003 109 ntBASIC-0.93□□□□□ -2.56
Lmx1bO88609 AC154832.1-201ENSMUST00000228928 141 ntBASIC-0.93□□□□□ -2.56
Lmx1bO88609 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-0.93□□□□□ -2.56
Lmx1bO88609 Mir7055-201ENSMUST00000197423 59 ntBASIC-0.94□□□□□ -2.56
Lmx1bO88609 Gm25132-201ENSMUST00000082652 107 ntBASIC-0.94□□□□□ -2.56
Lmx1bO88609 Gm24646-201ENSMUST00000157109 99 ntBASIC-0.95□□□□□ -2.56
Lmx1bO88609 Gm26472-201ENSMUST00000116760 83 ntBASIC-0.96□□□□□ -2.56
Lmx1bO88609 Gm25143-201ENSMUST00000082696 109 ntBASIC-0.99□□□□□ -2.57
Lmx1bO88609 Mir543-201ENSMUST00000102286 76 ntBASIC-1□□□□□ -2.57
Lmx1bO88609 Gm24531-201ENSMUST00000157945 100 ntBASIC-1□□□□□ -2.57
Lmx1bO88609 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1□□□□□ -2.57
Lmx1bO88609 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1□□□□□ -2.57
Lmx1bO88609 Gm24502-201ENSMUST00000158453 105 ntBASIC-1.01□□□□□ -2.57
Lmx1bO88609 Mir539-201ENSMUST00000102109 74 ntBASIC-1.03□□□□□ -2.57
Lmx1bO88609 Gm23613-201ENSMUST00000082596 87 ntBASIC-1.04□□□□□ -2.58
Lmx1bO88609 Gm27366-201ENSMUST00000184967 108 ntBASIC-1.08□□□□□ -2.58
Lmx1bO88609 Gm26043-201ENSMUST00000116912 91 ntBASIC-1.09□□□□□ -2.58
Lmx1bO88609 Mir6339-201ENSMUST00000185120 117 ntBASIC-1.09□□□□□ -2.58
Lmx1bO88609 Gm22232-201ENSMUST00000104654 94 ntBASIC-1.1□□□□□ -2.59
Lmx1bO88609 Gm24194-201ENSMUST00000116805 90 ntBASIC-1.12□□□□□ -2.59
Lmx1bO88609 Gm22313-201ENSMUST00000158008 129 ntBASIC-1.12□□□□□ -2.59
Lmx1bO88609 Snord58b-201ENSMUST00000082937 66 ntBASIC-1.13□□□□□ -2.59
Lmx1bO88609 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.14□□□□□ -2.59
Lmx1bO88609 Gm22925-201ENSMUST00000174956 102 ntBASIC-1.15□□□□□ -2.59
Lmx1bO88609 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.15□□□□□ -2.59
Lmx1bO88609 Gm22783-201ENSMUST00000104089 107 ntBASIC-1.16□□□□□ -2.6
Lmx1bO88609 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.16□□□□□ -2.6
Lmx1bO88609 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.16□□□□□ -2.6
Lmx1bO88609 Gm23556-201ENSMUST00000157821 92 ntBASIC-1.2□□□□□ -2.6
Lmx1bO88609 Gm23543-201ENSMUST00000158207 106 ntBASIC-1.2□□□□□ -2.6
Lmx1bO88609 Gm23421-201ENSMUST00000158934 104 ntBASIC-1.22□□□□□ -2.6
Lmx1bO88609 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-1.23□□□□□ -2.61
Lmx1bO88609 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.23□□□□□ -2.61
Lmx1bO88609 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-1.25□□□□□ -2.61
Lmx1bO88609 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.25□□□□□ -2.61
Lmx1bO88609 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.26□□□□□ -2.61
Lmx1bO88609 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.26□□□□□ -2.61
Lmx1bO88609 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.28□□□□□ -2.61
Lmx1bO88609 Gm22573-201ENSMUST00000082982 102 ntBASIC-1.28□□□□□ -2.61
Lmx1bO88609 Gm20473-201ENSMUST00000173064 112 ntBASIC-1.31□□□□□ -2.62
Lmx1bO88609 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.31□□□□□ -2.62
Lmx1bO88609 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.32□□□□□ -2.62
Lmx1bO88609 Mir7218-201ENSMUST00000200050 59 ntBASIC-1.32□□□□□ -2.62
Lmx1bO88609 Mir379-201ENSMUST00000083564 66 ntBASIC-1.33□□□□□ -2.62
Lmx1bO88609 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.36□□□□□ -2.63
Lmx1bO88609 Gm25886-201ENSMUST00000157780 114 ntBASIC-1.37□□□□□ -2.63
Lmx1bO88609 Mir122-201ENSMUST00000083468 66 ntBASIC-1.37□□□□□ -2.63
Lmx1bO88609 Gm24387-201ENSMUST00000104625 90 ntBASIC-1.38□□□□□ -2.63
Lmx1bO88609 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.38□□□□□ -2.63
Lmx1bO88609 Gm44303-201ENSMUST00000196348 83 ntBASIC-1.38□□□□□ -2.63
Lmx1bO88609 Mir664-201ENSMUST00000196796 69 ntBASIC-1.4□□□□□ -2.63
Lmx1bO88609 Mir7681-201ENSMUST00000184834 72 ntBASIC-1.42□□□□□ -2.64
Lmx1bO88609 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.43□□□□□ -2.64
Lmx1bO88609 Gm25905-201ENSMUST00000158490 101 ntBASIC-1.43□□□□□ -2.64
Lmx1bO88609 Gm22593-201ENSMUST00000104245 109 ntBASIC-1.46□□□□□ -2.64
Lmx1bO88609 Gm22566-201ENSMUST00000175541 85 ntBASIC-1.5□□□□□ -2.65
Lmx1bO88609 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.52□□□□□ -2.65
Lmx1bO88609 Gm26122-201ENSMUST00000083362 82 ntBASIC-1.56□□□□□ -2.66
Lmx1bO88609 Gm25049-201ENSMUST00000158597 73 ntBASIC-1.57□□□□□ -2.66
Lmx1bO88609 Gm23428-201ENSMUST00000122488 102 ntBASIC-1.58□□□□□ -2.66
Lmx1bO88609 Gm22296-201ENSMUST00000083310 103 ntBASIC-1.58□□□□□ -2.66
Lmx1bO88609 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-1.61□□□□□ -2.67
Lmx1bO88609 Gm24806-201ENSMUST00000117036 90 ntBASIC-1.64□□□□□ -2.67
Lmx1bO88609 Gm24016-201ENSMUST00000157726 68 ntBASIC-1.68□□□□□ -2.68
Lmx1bO88609 Mir493-201ENSMUST00000103837 83 ntBASIC-1.7□□□□□ -2.68
Lmx1bO88609 Gm23707-201ENSMUST00000104366 125 ntBASIC-1.7□□□□□ -2.68
Lmx1bO88609 Mir466o-201ENSMUST00000104832 84 ntBASIC-1.71□□□□□ -2.68
Lmx1bO88609 Gm23751-201ENSMUST00000157583 136 ntBASIC-1.71□□□□□ -2.68
Lmx1bO88609 Mir1912-201ENSMUST00000175298 87 ntBASIC-1.71□□□□□ -2.68
Lmx1bO88609 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-1.72□□□□□ -2.68
Lmx1bO88609 Mir470-201ENSMUST00000093565 75 ntBASIC-1.74□□□□□ -2.69
Lmx1bO88609 Gm24185-201ENSMUST00000122578 105 ntBASIC-1.76□□□□□ -2.69
Lmx1bO88609 Gm24631-201ENSMUST00000122765 81 ntBASIC-1.79□□□□□ -2.7
Lmx1bO88609 Gm44377-201ENSMUST00000199039 87 ntBASIC-1.79□□□□□ -2.7
Lmx1bO88609 Gm25867-201ENSMUST00000158254 103 ntBASIC-1.8□□□□□ -2.7
Lmx1bO88609 Gm44351-201ENSMUST00000200090 95 ntBASIC-1.8□□□□□ -2.7
Lmx1bO88609 Mir7670-201ENSMUST00000183689 69 ntBASIC-1.81□□□□□ -2.7
Lmx1bO88609 Gm25521-201ENSMUST00000158393 108 ntBASIC-1.86□□□□□ -2.71
Retrieved 100 of 76,532 protein–RNA pairs in 295.4 ms