Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm25812-201ENSMUST00000082751 103 ntBASIC-4.56□□□□□ -3.14
Hmgb3O54879 Gm23644-201ENSMUST00000157856 77 ntBASIC-4.6□□□□□ -3.15
Hmgb3O54879 Gm27882-201ENSMUST00000184904 74 ntBASIC-4.6□□□□□ -3.15
Hmgb3O54879 Gm27450-201ENSMUST00000104632 90 ntBASIC-4.62□□□□□ -3.15
Hmgb3O54879 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-4.62□□□□□ -3.15
Hmgb3O54879 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-4.62□□□□□ -3.15
Hmgb3O54879 Gm24234-201ENSMUST00000104316 107 ntBASIC-4.63□□□□□ -3.15
Hmgb3O54879 Gm26052-201ENSMUST00000104646 84 ntBASIC-4.63□□□□□ -3.15
Hmgb3O54879 AC157278.1-201ENSMUST00000221621 148 ntBASIC-4.68□□□□□ -3.16
Hmgb3O54879 Gm22213-201ENSMUST00000157564 119 ntBASIC-4.69□□□□□ -3.16
Hmgb3O54879 Mir6481-201ENSMUST00000184617 110 ntBASIC-4.69□□□□□ -3.16
Hmgb3O54879 n-R5s218-201ENSMUST00000122583 109 ntBASIC-4.73□□□□□ -3.17
Hmgb3O54879 Gm26485-201ENSMUST00000158019 64 ntBASIC-4.73□□□□□ -3.17
Hmgb3O54879 Gm26139-201ENSMUST00000180098 107 ntBASIC-4.74□□□□□ -3.17
Hmgb3O54879 Mir467g-201ENSMUST00000116906 120 ntBASIC-4.75□□□□□ -3.17
Hmgb3O54879 Mir1187-201ENSMUST00000116936 122 ntBASIC-4.75□□□□□ -3.17
Hmgb3O54879 Gm24167-201ENSMUST00000177733 124 ntBASIC-4.75□□□□□ -3.17
Hmgb3O54879 Gm24028-201ENSMUST00000178991 124 ntBASIC-4.75□□□□□ -3.17
Hmgb3O54879 Mir1955-201ENSMUST00000158014 98 ntBASIC-4.76□□□□□ -3.17
Hmgb3O54879 Mir124a-1-201ENSMUST00000083663 85 ntBASIC-4.77□□□□□ -3.17
Hmgb3O54879 Gm25509-201ENSMUST00000116985 106 ntBASIC-4.78□□□□□ -3.17
Hmgb3O54879 Gm22056-201ENSMUST00000083386 81 ntBASIC-4.78□□□□□ -3.17
Hmgb3O54879 Gm23966-201ENSMUST00000179823 107 ntBASIC-4.79□□□□□ -3.18
Hmgb3O54879 Gm24226-201ENSMUST00000158826 97 ntBASIC-4.8□□□□□ -3.18
Hmgb3O54879 Gm11966-201ENSMUST00000119907 87 ntBASIC-4.81□□□□□ -3.18
Hmgb3O54879 Gm23350-201ENSMUST00000158429 103 ntBASIC-4.81□□□□□ -3.18
Hmgb3O54879 Mir664-201ENSMUST00000196796 69 ntBASIC-4.81□□□□□ -3.18
Hmgb3O54879 Mir125b-1-201ENSMUST00000175613 77 ntBASIC-4.83□□□□□ -3.18
Hmgb3O54879 Gm25681-201ENSMUST00000083938 106 ntBASIC-4.85□□□□□ -3.19
Hmgb3O54879 Gm24651-201ENSMUST00000157107 107 ntBASIC-4.87□□□□□ -3.19
Hmgb3O54879 Gm23578-201ENSMUST00000103943 104 ntBASIC-4.88□□□□□ -3.19
Hmgb3O54879 Gm25465-201ENSMUST00000157716 105 ntBASIC-4.89□□□□□ -3.19
Hmgb3O54879 Gm22039-201ENSMUST00000157278 132 ntBASIC-4.93□□□□□ -3.2
Hmgb3O54879 Gm22260-201ENSMUST00000178643 107 ntBASIC-4.93□□□□□ -3.2
Hmgb3O54879 Mir450b-201ENSMUST00000102095 82 ntBASIC-4.94□□□□□ -3.2
Hmgb3O54879 Gm22925-201ENSMUST00000174956 102 ntBASIC-4.96□□□□□ -3.2
Hmgb3O54879 Gm23678-201ENSMUST00000083157 107 ntBASIC-4.98□□□□□ -3.21
Hmgb3O54879 Gm24710-201ENSMUST00000175235 101 ntBASIC-4.99□□□□□ -3.21
Hmgb3O54879 Gm24135-201ENSMUST00000179085 101 ntBASIC-4.99□□□□□ -3.21
Hmgb3O54879 Gm22845-201ENSMUST00000157712 104 ntBASIC-5□□□□□ -3.21
Hmgb3O54879 Gm25867-201ENSMUST00000158254 103 ntBASIC-5.02□□□□□ -3.21
Hmgb3O54879 Gm24605-201ENSMUST00000104772 96 ntBASIC-5.04□□□□□ -3.22
Hmgb3O54879 Gm23785-201ENSMUST00000116741 96 ntBASIC-5.04□□□□□ -3.22
Hmgb3O54879 Gm23652-201ENSMUST00000116752 107 ntBASIC-5.04□□□□□ -3.22
Hmgb3O54879 Gm22195-201ENSMUST00000116861 108 ntBASIC-5.07□□□□□ -3.22
Hmgb3O54879 Gm22251-201ENSMUST00000083216 107 ntBASIC-5.07□□□□□ -3.22
Hmgb3O54879 Gm25987-201ENSMUST00000083234 107 ntBASIC-5.07□□□□□ -3.22
Hmgb3O54879 Gm25222-201ENSMUST00000158199 126 ntBASIC-5.1□□□□□ -3.23
Hmgb3O54879 Snord50a-201ENSMUST00000178154 72 ntBASIC-5.1□□□□□ -3.23
Hmgb3O54879 Gm24463-201ENSMUST00000178417 72 ntBASIC-5.1□□□□□ -3.23
Hmgb3O54879 Gm26008-201ENSMUST00000158797 99 ntBASIC-5.12□□□□□ -3.23
Hmgb3O54879 Gm23293-201ENSMUST00000082552 104 ntBASIC-5.14□□□□□ -3.23
Hmgb3O54879 Gm24148-201ENSMUST00000082762 80 ntBASIC-5.17□□□□□ -3.24
Hmgb3O54879 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-5.18□□□□□ -3.24
Hmgb3O54879 Mir669a-3-201ENSMUST00000102074 109 ntBASIC-5.24□□□□□ -3.25
Hmgb3O54879 Mir7116-201ENSMUST00000195956 70 ntBASIC-5.24□□□□□ -3.25
Hmgb3O54879 Gm23038-201ENSMUST00000083873 104 ntBASIC-5.24□□□□□ -3.25
Hmgb3O54879 Mir297a-2-201ENSMUST00000103795 90 ntBASIC-5.25□□□□□ -3.25
Hmgb3O54879 Snord58b-201ENSMUST00000082937 66 ntBASIC-5.26□□□□□ -3.25
Hmgb3O54879 Gm25382-201ENSMUST00000157811 97 ntBASIC-5.3□□□□□ -3.26
Hmgb3O54879 Gm22078-201ENSMUST00000157593 103 ntBASIC-5.31□□□□□ -3.26
Hmgb3O54879 Gm25815-201ENSMUST00000082755 107 ntBASIC-5.31□□□□□ -3.26
Hmgb3O54879 mt-Tl2-201ENSMUST00000082417 71 ntBASIC-5.33□□□□□ -3.26
Hmgb3O54879 Gm22474-201ENSMUST00000179407 107 ntBASIC-5.34□□□□□ -3.26
Hmgb3O54879 Gm22950-201ENSMUST00000082776 107 ntBASIC-5.35□□□□□ -3.27
Hmgb3O54879 Gm20734-201ENSMUST00000216939 193 ntBASIC-5.39□□□□□ -3.27
Hmgb3O54879 Gm23210-201ENSMUST00000158668 98 ntBASIC-5.4□□□□□ -3.27
Hmgb3O54879 Gm26306-201ENSMUST00000157773 119 ntBASIC-5.46□□□□□ -3.28
Hmgb3O54879 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC-5.48□□□□□ -3.29
Hmgb3O54879 Gm25022-201ENSMUST00000102205 83 ntBASIC-5.49□□□□□ -3.29
Hmgb3O54879 Gm22679-201ENSMUST00000116975 100 ntBASIC-5.49□□□□□ -3.29
Hmgb3O54879 Mir467a-6-201ENSMUST00000177790 83 ntBASIC-5.49□□□□□ -3.29
Hmgb3O54879 Mir467a-3-201ENSMUST00000178082 83 ntBASIC-5.49□□□□□ -3.29
Hmgb3O54879 Mir467a-7-201ENSMUST00000178635 83 ntBASIC-5.49□□□□□ -3.29
Hmgb3O54879 Mir467a-10-201ENSMUST00000179320 83 ntBASIC-5.49□□□□□ -3.29
Hmgb3O54879 Mir467a-5-201ENSMUST00000179352 83 ntBASIC-5.49□□□□□ -3.29
Hmgb3O54879 Mir467a-2-201ENSMUST00000179447 83 ntBASIC-5.49□□□□□ -3.29
Hmgb3O54879 Mir467a-9-201ENSMUST00000179752 83 ntBASIC-5.49□□□□□ -3.29
Hmgb3O54879 Mir467a-4-201ENSMUST00000179923 83 ntBASIC-5.49□□□□□ -3.29
Hmgb3O54879 Mir467a-8-201ENSMUST00000180070 83 ntBASIC-5.49□□□□□ -3.29
Hmgb3O54879 Gm24387-201ENSMUST00000104625 90 ntBASIC-5.54□□□□□ -3.3
Hmgb3O54879 Gm27671-201ENSMUST00000183739 66 ntBASIC-5.55□□□□□ -3.3
Hmgb3O54879 Gm26227-201ENSMUST00000082510 101 ntBASIC-5.55□□□□□ -3.3
Hmgb3O54879 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC-5.56□□□□□ -3.3
Hmgb3O54879 Gm24410-201ENSMUST00000083433 107 ntBASIC-5.63□□□□□ -3.31
Hmgb3O54879 Gm23961-201ENSMUST00000104685 97 ntBASIC-5.67□□□□□ -3.32
Hmgb3O54879 Gm22381-201ENSMUST00000158186 107 ntBASIC-5.67□□□□□ -3.32
Hmgb3O54879 Mir7681-201ENSMUST00000184834 72 ntBASIC-5.73□□□□□ -3.33
Hmgb3O54879 Gm24590-201ENSMUST00000116699 119 ntBASIC-5.74□□□□□ -3.33
Hmgb3O54879 Gm44353-201ENSMUST00000200618 138 ntBASIC-5.75□□□□□ -3.33
Hmgb3O54879 Gm22301-201ENSMUST00000082656 107 ntBASIC-5.76□□□□□ -3.33
Hmgb3O54879 Gm22127-201ENSMUST00000083239 106 ntBASIC-5.77□□□□□ -3.33
Hmgb3O54879 Gm24482-201ENSMUST00000117005 93 ntBASIC-5.78□□□□□ -3.33
Hmgb3O54879 AL929417.1-201ENSMUST00000214901 124 ntBASIC-5.82□□□□□ -3.34
Hmgb3O54879 Gm22550-201ENSMUST00000179774 107 ntBASIC-5.83□□□□□ -3.34
Hmgb3O54879 Gm22060-201ENSMUST00000082558 107 ntBASIC-5.83□□□□□ -3.34
Hmgb3O54879 Mir34c-201ENSMUST00000083653 77 ntBASIC-5.87□□□□□ -3.35
Hmgb3O54879 Gm25521-201ENSMUST00000158393 108 ntBASIC-5.89□□□□□ -3.35
Hmgb3O54879 n-R5s214-201ENSMUST00000122494 121 ntBASIC-5.93□□□□□ -3.36
Hmgb3O54879 Gm25524-201ENSMUST00000101821 107 ntBASIC-5.94□□□□□ -3.36
Retrieved 100 of 76,532 protein–RNA pairs in 155.5 ms