Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Mir1839-201ENSMUST00000175366 127 ntBASIC-0.24□□□□□ -2.45
Trim39Q9ESN2 Mir141-201ENSMUST00000083540 72 ntBASIC-0.24□□□□□ -2.45
Trim39Q9ESN2 Mir96-201ENSMUST00000083652 106 ntBASIC-0.25□□□□□ -2.45
Trim39Q9ESN2 Gm25431-201ENSMUST00000101978 107 ntBASIC-0.26□□□□□ -2.45
Trim39Q9ESN2 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.26□□□□□ -2.45
Trim39Q9ESN2 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.26□□□□□ -2.45
Trim39Q9ESN2 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.26□□□□□ -2.45
Trim39Q9ESN2 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.26□□□□□ -2.45
Trim39Q9ESN2 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.26□□□□□ -2.45
Trim39Q9ESN2 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.26□□□□□ -2.45
Trim39Q9ESN2 Mir214-201ENSMUST00000083582 110 ntBASIC-0.27□□□□□ -2.45
Trim39Q9ESN2 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.28□□□□□ -2.45
Trim39Q9ESN2 Gm44347-201ENSMUST00000199602 108 ntBASIC-0.28□□□□□ -2.45
Trim39Q9ESN2 Mir466q-201ENSMUST00000175249 76 ntBASIC-0.29□□□□□ -2.46
Trim39Q9ESN2 Gm25995-201ENSMUST00000175396 142 ntBASIC-0.29□□□□□ -2.46
Trim39Q9ESN2 Gm25023-201ENSMUST00000082977 107 ntBASIC-0.29□□□□□ -2.46
Trim39Q9ESN2 Gm22197-201ENSMUST00000116866 58 ntBASIC-0.3□□□□□ -2.46
Trim39Q9ESN2 Mir466f-1-201ENSMUST00000104779 94 ntBASIC-0.31□□□□□ -2.46
Trim39Q9ESN2 Gm25886-201ENSMUST00000157780 114 ntBASIC-0.31□□□□□ -2.46
Trim39Q9ESN2 Gm44589-201ENSMUST00000207025 115 ntBASIC-0.31□□□□□ -2.46
Trim39Q9ESN2 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.32□□□□□ -2.46
Trim39Q9ESN2 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.32□□□□□ -2.46
Trim39Q9ESN2 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.32□□□□□ -2.46
Trim39Q9ESN2 Gm22550-201ENSMUST00000179774 107 ntBASIC-0.32□□□□□ -2.46
Trim39Q9ESN2 Gm22060-201ENSMUST00000082558 107 ntBASIC-0.32□□□□□ -2.46
Trim39Q9ESN2 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.33□□□□□ -2.46
Trim39Q9ESN2 Gm25132-201ENSMUST00000082652 107 ntBASIC-0.34□□□□□ -2.46
Trim39Q9ESN2 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.35□□□□□ -2.47
Trim39Q9ESN2 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.35□□□□□ -2.47
Trim39Q9ESN2 Mir6957-201ENSMUST00000183708 64 ntBASIC-0.36□□□□□ -2.47
Trim39Q9ESN2 Gm26227-201ENSMUST00000082510 101 ntBASIC-0.36□□□□□ -2.47
Trim39Q9ESN2 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.37□□□□□ -2.47
Trim39Q9ESN2 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.37□□□□□ -2.47
Trim39Q9ESN2 Snord16a-201ENSMUST00000083895 99 ntBASIC-0.37□□□□□ -2.47
Trim39Q9ESN2 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-0.38□□□□□ -2.47
Trim39Q9ESN2 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-0.38□□□□□ -2.47
Trim39Q9ESN2 Gm25225-201ENSMUST00000158197 102 ntBASIC-0.39□□□□□ -2.47
Trim39Q9ESN2 Gm24097-201ENSMUST00000178720 107 ntBASIC-0.39□□□□□ -2.47
Trim39Q9ESN2 Gm25772-201ENSMUST00000158574 56 ntBASIC-0.4□□□□□ -2.47
Trim39Q9ESN2 Gm25712-201ENSMUST00000158634 93 ntBASIC-0.4□□□□□ -2.47
Trim39Q9ESN2 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.41□□□□□ -2.48
Trim39Q9ESN2 Gm19248-201ENSMUST00000209404 110 ntBASIC-0.41□□□□□ -2.48
Trim39Q9ESN2 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.41□□□□□ -2.48
Trim39Q9ESN2 Gm24381-201ENSMUST00000122697 104 ntBASIC-0.42□□□□□ -2.48
Trim39Q9ESN2 Mir367-201ENSMUST00000083479 75 ntBASIC-0.44□□□□□ -2.48
Trim39Q9ESN2 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.44□□□□□ -2.48
Trim39Q9ESN2 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-0.44□□□□□ -2.48
Trim39Q9ESN2 Gm23904-201ENSMUST00000157567 124 ntBASIC-0.45□□□□□ -2.48
Trim39Q9ESN2 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.46□□□□□ -2.48
Trim39Q9ESN2 Gm24003-201ENSMUST00000158455 100 ntBASIC-0.46□□□□□ -2.48
Trim39Q9ESN2 Mir677-202ENSMUST00000197076 78 ntBASIC-0.46□□□□□ -2.48
Trim39Q9ESN2 Gm22602-201ENSMUST00000157596 95 ntBASIC-0.47□□□□□ -2.48
Trim39Q9ESN2 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.47□□□□□ -2.48
Trim39Q9ESN2 Mir1969-201ENSMUST00000157623 94 ntBASIC-0.49□□□□□ -2.49
Trim39Q9ESN2 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.49□□□□□ -2.49
Trim39Q9ESN2 Gm26262-201ENSMUST00000158024 127 ntBASIC-0.5□□□□□ -2.49
Trim39Q9ESN2 Gm22232-201ENSMUST00000104654 94 ntBASIC-0.51□□□□□ -2.49
Trim39Q9ESN2 Gm24673-201ENSMUST00000116948 124 ntBASIC-0.51□□□□□ -2.49
Trim39Q9ESN2 Gm23108-201ENSMUST00000178295 124 ntBASIC-0.51□□□□□ -2.49
Trim39Q9ESN2 Mir6904-201ENSMUST00000183443 67 ntBASIC-0.51□□□□□ -2.49
Trim39Q9ESN2 Gm23811-201ENSMUST00000175155 84 ntBASIC-0.52□□□□□ -2.49
Trim39Q9ESN2 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.54□□□□□ -2.5
Trim39Q9ESN2 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.54□□□□□ -2.5
Trim39Q9ESN2 Mir28c-201ENSMUST00000200096 75 ntBASIC-0.54□□□□□ -2.5
Trim39Q9ESN2 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.55□□□□□ -2.5
Trim39Q9ESN2 CT030166.3-201ENSMUST00000223203 193 ntBASIC-0.55□□□□□ -2.5
Trim39Q9ESN2 Gm45688-201ENSMUST00000210002 101 ntBASIC-0.56□□□□□ -2.5
Trim39Q9ESN2 Gm24296-201ENSMUST00000158297 106 ntBASIC-0.57□□□□□ -2.5
Trim39Q9ESN2 Gm24194-201ENSMUST00000116805 90 ntBASIC-0.58□□□□□ -2.5
Trim39Q9ESN2 AC122210.2-201ENSMUST00000220216 115 ntBASIC-0.58□□□□□ -2.5
Trim39Q9ESN2 Mir183-201ENSMUST00000083685 70 ntBASIC-0.58□□□□□ -2.5
Trim39Q9ESN2 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.59□□□□□ -2.5
Trim39Q9ESN2 Mir7057-201ENSMUST00000184685 58 ntBASIC-0.59□□□□□ -2.5
Trim39Q9ESN2 Gm24646-201ENSMUST00000157109 99 ntBASIC-0.62□□□□□ -2.51
Trim39Q9ESN2 Gm22489-201ENSMUST00000116813 62 ntBASIC-0.64□□□□□ -2.51
Trim39Q9ESN2 Gm25108-201ENSMUST00000122473 78 ntBASIC-0.64□□□□□ -2.51
Trim39Q9ESN2 Gm23315-201ENSMUST00000158003 109 ntBASIC-0.64□□□□□ -2.51
Trim39Q9ESN2 Gm23166-201ENSMUST00000157164 101 ntBASIC-0.66□□□□□ -2.52
Trim39Q9ESN2 Gm25429-201ENSMUST00000157607 132 ntBASIC-0.66□□□□□ -2.52
Trim39Q9ESN2 Gm22013-201ENSMUST00000158788 103 ntBASIC-0.67□□□□□ -2.52
Trim39Q9ESN2 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.67□□□□□ -2.52
Trim39Q9ESN2 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.67□□□□□ -2.52
Trim39Q9ESN2 Gm23308-201ENSMUST00000179475 107 ntBASIC-0.67□□□□□ -2.52
Trim39Q9ESN2 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.67□□□□□ -2.52
Trim39Q9ESN2 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-0.67□□□□□ -2.52
Trim39Q9ESN2 Gm27610-201ENSMUST00000184026 74 ntBASIC-0.68□□□□□ -2.52
Trim39Q9ESN2 Mir574-201ENSMUST00000103854 78 ntBASIC-0.69□□□□□ -2.52
Trim39Q9ESN2 Gm25493-201ENSMUST00000157375 103 ntBASIC-0.69□□□□□ -2.52
Trim39Q9ESN2 Snord58b-201ENSMUST00000082937 66 ntBASIC-0.7□□□□□ -2.52
Trim39Q9ESN2 Mir302c-201ENSMUST00000083548 68 ntBASIC-0.7□□□□□ -2.52
Trim39Q9ESN2 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.7□□□□□ -2.52
Trim39Q9ESN2 Gm22593-201ENSMUST00000104245 109 ntBASIC-0.71□□□□□ -2.52
Trim39Q9ESN2 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.71□□□□□ -2.52
Trim39Q9ESN2 Gm26472-201ENSMUST00000116760 83 ntBASIC-0.72□□□□□ -2.52
Trim39Q9ESN2 Gm20473-201ENSMUST00000173064 112 ntBASIC-0.72□□□□□ -2.52
Trim39Q9ESN2 Gm24714-201ENSMUST00000102382 101 ntBASIC-0.73□□□□□ -2.53
Trim39Q9ESN2 Gm22925-201ENSMUST00000174956 102 ntBASIC-0.73□□□□□ -2.53
Trim39Q9ESN2 Gm24502-201ENSMUST00000158453 105 ntBASIC-0.74□□□□□ -2.53
Trim39Q9ESN2 Gm44311-201ENSMUST00000196448 69 ntBASIC-0.74□□□□□ -2.53
Trim39Q9ESN2 Mir192-201ENSMUST00000083589 89 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms